LOC110528532 (fndc11)


Basic Information

Item Value
gene id LOC110528532
gene name fndc11
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77187663 ~ 77197139 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610644.2
agcagggagcaggtctggAGTTGTACCTAGAAACTAAGCCAAGACCTCTGGCTACTGTAATCGTCTCAACATGTATGCAAGTATGACCTCACAATGTTGCACATGTGCCATTTGAGTTCGTAGCTATGGTAACTTTTAAAAGCACCAAttaaaaacaacatttattttcaAACTATTCGTGGTGCAAGACGGCAATGCATTAGACCGAGCAGCTGACATGAAAAGAATGATGACCCCCCCGAGCGATGACAGTGACGTAAGCGATCAGCGCCACCCCATGAAGACACGCTGCGCTGGTGGCCAGGGAGGAGACAGCCCCGGCATGGACCCGAAAAAATGGATCACCTTCAAAGACCTCCATGACCGGGTCACGCAGCTGCTCTCCACTAAGCTCAACTCCTGTAACATCAAGCAGTGCAAGTCCAAACTGGACATCCTCAGTAAGTGCTCCTATTACCTGGAGGTCATGCGCCAGGACACACTCCACCAACCAGACCCGCAGCAGAACTACCTGTCCAACTCCACCATCCTCCACCTCATCGATCCCTGGAAGTTCCAGCGGATGAAGAAGCTGGGCCACAGCCAGGTGCAGATCCAGCTGAGCCTGCTGGAAGAGCTCTACGAGCAGTTCTGTAAGGGCAAAGTGGAAATGGAGGCCATAGCCAGCCAGAGCGACTATGGCGATCAAGAGGTCGCCCACATAAATGGGAGGATAGCGCATCTCATTAAGGCGTTCACGGACTTTGACTCGACACTGATGCCCGGGGAGCTGCACACAAAGCACCGGCTCATCTCCGAGACGGGCAACGCCAAGGTGCCCCAGATCCATTTGAGGCTGTCCGTCAAAATGCCCGTGATGTTCGACACGTCACGCTCGGAGGCTCTGGCCGACTGCGCCCGGCTGCACTGGGAAATGGCCGGGCAGGAGCAGCAGGAGCCTGGGGAACAGTTTGAGATCCGCTACAAGCTCCTCCAGCCGACCAACACAGAGGAAGGGAACCAGCTAGGAACGGTGACCTGCAACTCCTACTGCATACAGGTCAACAACCTGTTGCCGCAAAGGTGCTACGAGTTCACAGTGAAGCGGGCTGACGCCTGCTGCCTGGTCTACGGGTTCTGGAATGACACCATGGTGCTCAGAACCATGCCACTATCCCCAGGGGGCTTCACCGGGAgccaggagaagaggaggaggctgtTCCCCTGGTAAAGGGCTAGCGTGGCGTGAGTGCATAGCAATATgaaaataaagacattttaattttttttatctcTCTAATAAAATACATTGTCAAGATTTTGGG

Function

symbol description
fndc11 Orthologous to human FNDC11 (fibronectin type III domain containing 11).

NR:

description
fibronectin type III domain-containing protein 11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610644.2 True 1304 mRNA 0.53 2 77187663 77197139

Neighbor

gene id symbol gene type direction distance location
si:ch73-267c23.10 LOC106583622 coding downstream 41941 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 75736 77106141 ~ 77111927 (-)
LOC118965366 LOC106565264 coding downstream 97290 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 180520 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 208508 76793582 ~ 76979155 (-)
LOC110529033 LOC106583621 coding upstream 20921 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 52813 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 104321 77301460 ~ 77304319 (-)
LOC110528536 arfrp1 coding upstream 151939 77349078 ~ 77355461 (-)
LOC110529034 LOC106583646 coding upstream 183615 77380754 ~ 77390369 (-)
G649958 NA non-coding downstream 16065 77171351 ~ 77171598 (-)
G649956 p2ry1 non-coding downstream 17092 77168782 ~ 77170571 (-)
G649826 NA non-coding downstream 20361 77167063 ~ 77167302 (-)
G649825 NA non-coding downstream 20640 77166765 ~ 77167023 (-)
G649823 NA non-coding downstream 21008 77166377 ~ 77166655 (-)
G649991 NA non-coding upstream 5255 77202394 ~ 77202734 (-)
G649994 NA non-coding upstream 7982 77205121 ~ 77206741 (-)
G649997 NA non-coding upstream 14792 77211931 ~ 77212307 (-)
G649978 LOC106583651 non-coding upstream 91228 77288367 ~ 77344077 (-)
G650044 NA non-coding upstream 182317 77379456 ~ 77380682 (-)
G649684 LOC100136508 other downstream 171062 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 966732 76214701 ~ 76220931 (-)
G649025 NA other downstream 1566726 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2079747 75106897 ~ 75107924 (-)
G646073 NA other downstream 3376206 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 832105 78029244 ~ 78029753 (-)
G650763 NA other upstream 846160 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1079009 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2256936 79454075 ~ 79457103 (-)

Expression


Co-expression Network