LOC110529033 (LOC106583621)


Basic Information

Item Value
gene id LOC110529033
gene name LOC106583621
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77218060 ~ 77231065 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611174.2
AAGAGAATGGTATAGTCTTTAGATTTGCCCTCCCCTCCTTGAATTTTTGCTCCGCTAGGCTCAAATATTGATTGTGTGTGATAACGCCATTGAGCAGTGTAATCAAATCATCCTCACAAACATTGGAAGGTGTATAAATAACAAGCGCTCGTTTGCTTTTTAGTCGAAAGGTATGAAAGGAAAGCAGTGTATACCTCATTTCCTCGTGTATTCGCTTTTAACGTGAAGACATCCATGGATACAGGTGACAACAAACGTAGACGGGCGAGGAGTGTGAGAGGCAAAATAACTGGTACGCAAGATGCGTCTGCGAAAAGGGAAAATGCAAACGTCCTAAGATCTTTGAGTGTTGGGAATACAGACGACAATGATGCCATGGAGGATGACGCTGGCTTTATCAAAAATTGGAGTTTGGAGCGAAAGGTCATGGCTCCGCGGTACAGTTTACTCCGTGAGGTCGGAAGGGGCAGCTATGGCGTGGTCTATGAAGCGATTGCACGGAGGTCGGGTGCAAGCGTTGCAGTAAAGAAACTTCGATGCGATGCACCAGAAAATGTCGAGCTTGCCTTGGCAGAATTCTGGGCCCTGGCTAGCCTTGAGAAACGACACGAGAATGTGGTGCAATTGGAAGAATGTGTGCTACAAAGAAACGGTATGGCTCAGAAAATGAGTCATGGGAACAAGAGATCCAAACAATACTTGCGTTTGGTGGAGACGTCATTAAAAGGTGAGAGAGTGCTGAGCCACCCAGAGGAGCCCTGCTACCTTTGGTTCGTCATGGAGTTCTGTGAAGGTGGAGACCTGAACCAGTTCATCCTGTCGCGACGACCTGACCCGCTGACCAACAACAGTTTCATGCTCCAGCTCACCAGTGCCGTGGCCTTCCTGCATGAAAACAACATTGTCCACCGAGACCTCAAGCCTGACAACATCCTCATCTCTGAAAAGTCGGGGACACCAGTTCTCAAAGTCGCCGATTTCGGCCTCAGCAAGGTGTGTGCTGGCCTAGGGGGCGCTGGGAAGGACAACGAGGGTGAAGACAAGAACAAAAACGTTGTCAACGTCAACAAGTTCTGGTTGTCGTCGGCATGCGGCTCAGACTTCTACATGGCACCCGAGGTGTGGGAGGGCCACTACACAGCCAAGGCGGACATCTTCGCCCTTGGCATCATCATCTGGGCAATGCTGGAGCGGATCACCTTTATCGACGCTGAGTCCAAGCGCGAGCTGCTGGGAACTTACGTGAGGCAGGGCGCCGACATCGTGCCAGTTGGCGAGGCACTGCTAGAGAACCCAAAGATGGTACTGAACATCCCGCAGAAGCGCAAGTCCTCCATGTCAGATGGGGTGAAGAAACTTCTGCAGGACATGCTGTCGGTCAACCCGCAGGACCGGCCCGATGCGCTTGAGCTACACAACAGGATGGACCAGCTCACATGTGCtgcgtgacccccccccccccccccccccccgagcatCGGAACTAGAACTCTTTCCCCAGGTACCACTTTCAAACTTCCTGGACCCAATGAATCAGTGAAAGTACACTTTACTTTGGAAGACTGTGAAATATCTACCGTGAGAAAAGAAAAGGGAAGCATTCGAGCCAACTGCTAATTGATACCGCAAATGGAATTAGTATTCTATCAGTACAGTTCTCTCAACCTATATTGTTACAGGGAATGTTTTACATGGCCTGAAATTAATTGTAGAATAATGATTACACATGTACTCCATTTGTATTGATATACCTGTTATATCTGCTGCTTTGTAGTAGGATggccatgtttgtttgtttgtttgtcctgAATGTGTCTGTTTTGGGTTCACCCTGTGAACCGGTGGCACTGTGTATCAAGACACGTTTGATATATGTTCAACACCTCGGCCACTTTGTGTGCATGCTTCACTGACACCCTACCATCTTGCCCCATCTTCCATTGACAAACTACATTATCCTACTGACAGCTTTTCATCCCGTTTCACTTTACCTTGTCCATCACTTGAAGGCATGACATAAAATGGTGAGCAAATTGTTGATTTGAAACCAGTGgactgaaaatatatattttttacagatGGTCTGTGCACCTTTTGCTTAAATGATTTAAATCCAAGTAGCCTTTTTTATTATGCCCCACCGTGCCTTGATAATCATCTGAAAGTGGGATTGAAATTACCATTTTAACTGTGTTCTTTCATTTGAaatttgaccttttttttttGGTTTGGAAAGTGTGCATTTAAAGCCGatgggtgccatttgagatgtgaTGAGATCGATGCTGTGGATATGGTGACATCACCCATAGGGATATTCTTTGATTTAGACTGAGCCCAGTCGTTGGTAAAAAGAAAAAGCTGTTTAAGGTGTACTGTGTTTTTAAACTATTGGATTGCTCCTAAGAGACTGGCTACCACCCTATATCTCCTCTCAACTCAGTATATTGACTGGTCATGTATTTTTGTGAATTGTTTTTGCCATCTCACACTTTACATAAGAGCAGCATATTGATCTGTTTGATTCTGTTTTAAGATTGTTTGttctaaaaaaaatgtttttaatgattTTCTTTTTGAGCCATTTTGTTGAAGGGTATTTTATCTTTGAGCTTCCCAAACACCTGGTAGGATCTTACATATCGCAAATGTGTGACAAACACGGGATggcacagttttttttttattcggGATAGTGATCGTTGACTATTACTGAGAATCTTGATCACATTTAGAGAAATTTGATCGGAGGAAATTACGACTGAAATTCTTTAGTTAAATTATTTTAGTTCAAAGTTAATTTTAACTACCTAACAAAACTACAATCTcagatttttgttgttgctttgtaAATCGTTGCCATTAATTGAGATCACTTTTAGTTCTGCATCGAAGTGTTTTCCTCTTTTGTGGTTTAGTCACTAAGCAGCCATATAGACTTGTTTCCAATCCTCCTTTGTGTATTATGCTACCTCATTTGCCTGCACGTTTGCAGAGACTTTCCTCAACTGAGCCATCATGTTtgtctgtgtatatatattttttctgatTCTTTGGGAAGGGCAAGGTTGCGAATCCCATTGCTATCAGAACTAAGTTTATGTAAGTTGTCTGTTCTATTCAACAGTATTTTTCATATGTGTTGCTTAATTTTCATTTAAGCAAAGAAAATGGGTCATTTCTTGTTTAACCTTAAGATCTAAAGGGTTATCCAAATTACACAACTTCTGTCATTTTACACAAGTGGAACGGGTCAGttaggtttttttttttgtctgtacCCATTTTGAGTTTGGTTTGCATTTAGCTGAAGCTTACTTTTTAAGGCAGGCAGTTATCTTTCTAATACAATTGTCATCTTTCTCTTATGGTTTCTGCCATGTTTTGATCACCCTTCCCTTGAGAAATATACCTCATGTTCCACTACTTGTTTTCTGCCCGGGGTTGGTAAACTGTATGACCTGTCAGCAAGCTCAAGGTCAGAATTGTTGTTTTTTGAGATACCTAATTTAACGAAAGGGACCATGGAGACAAGTATAAgagactgtattttttttttttaaagaatcttATTTATACTACTTTAATTCAGTCTATTTCAAGCTCTTCATGCAATCTTTTTACTCAACTGAAAATATTCCTGTAGTGTACTGTGGCAGGTTTGCTGTACAAGAGGTGACACCAAATATCCCAATAGTCTCAGATGTACAGTAAAACTAACTCTTCTTTTGCTGCTGGGTTTGGTAAATTACAGATCTACCTGTCGATGTTTAGTAACGTGTGGTTTGCTGCTGATTTAGAGACGCACTTTCGTCTCATGTTCTTTACTTTCTCAATCATGCAGAGATGGAGTATTTTAGAGTTCCATTTGGTGATTCACACAACAGGCTTCTATGCAACCGTCCCTCACTAAAAACACTGTGCAACGAAGCAGGTTCGACCTGTTCTAATTTTTTGCTATTTTAATTGCTTGTCATCTTTCTCTGAGGGTTTTTAGAGGAGGAATCTCCATATTATCGTGATGTGAATTATGCTTCCTATCATTTCAATGGAATTCACTGTCCTTGGTCTGGTCTTAGAGCGTACTAGAGATGTTAGCTTCAGTGAAGACTTCTCTTTGGTATTGTTGTACATCTTTTGGTTTCTCTTCCAATAAAGTCTATGaacaaaaata

Function

NR:

description
serine/threonine-protein kinase 35-like, partial

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08859 STK35, PDIK1, CLIK1; serine/threonine kinase 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611174.2 True 4174 mRNA 0.42 3 77218060 77231065
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528532 fndc11 coding downstream 20921 77187663 ~ 77197139 (-)
si:ch73-267c23.10 LOC106583622 coding downstream 72338 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 106133 77106141 ~ 77111927 (-)
LOC118965366 LOC106565264 coding downstream 127687 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 210917 77006314 ~ 77007143 (-)
helz2a helz2 coding upstream 18887 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 70395 77301460 ~ 77304319 (-)
LOC110528536 arfrp1 coding upstream 118013 77349078 ~ 77355461 (-)
LOC110529034 LOC106583646 coding upstream 149689 77380754 ~ 77390369 (-)
LOC110528538 LOC106583648 coding upstream 173823 77404888 ~ 77463817 (-)
G649997 NA non-coding downstream 5753 77211931 ~ 77212307 (-)
G649994 NA non-coding downstream 11319 77205121 ~ 77206741 (-)
G649991 NA non-coding downstream 15326 77202394 ~ 77202734 (-)
G649985 NA non-coding downstream 22175 77195544 ~ 77195885 (-)
G649984 NA non-coding downstream 23047 77194542 ~ 77195013 (-)
G649978 LOC106583651 non-coding upstream 57302 77288367 ~ 77344077 (-)
G650044 NA non-coding upstream 148391 77379456 ~ 77380682 (-)
G650057 NA non-coding upstream 170497 77401562 ~ 77401987 (-)
G650058 NA non-coding upstream 180327 77411392 ~ 77411620 (-)
G649684 LOC100136508 other downstream 201459 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 997129 76214701 ~ 76220931 (-)
G649025 NA other downstream 1597123 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2110144 75106897 ~ 75107924 (-)
G646073 NA other downstream 3406603 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 798179 78029244 ~ 78029753 (-)
G650763 NA other upstream 812234 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1045083 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2223010 79454075 ~ 79457103 (-)

Expression

LOC110529033(LOC106583621) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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LOC110529033(LOC106583621) Expression in each Bioproject

Bar chart with 21 bars.
LOC110529033(LOC106583621) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network