LOC118965318


Basic Information

Item Value
gene id LOC118965318
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77301460 ~ 77304319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052674.1
CCAGGGCCTTGTGGAGCACCTGTCGCTCGTGCTCCCGCTTCTCAGCTAGCTGCTTCAGCACCAGGGCCTCCtgagactgcagagagagacgagggagagagatgCTTCCAGCCTCTTCTGGAGCTCGTCCGGGGAGAGGTCCTTCTTGGGAGCAGAAAGCAGGGGCTGGGGCCTGTCCGgagagaggtcagcaggggccTTCAGGATGATCTCGAAGGCCTGGCCGGATGCCCGCTTGTTCAGGGACTTCACCTCCATGTCTGTGGAGAACAGCAGgtgggtTAGGTTCCCTCCACTCTAAATGGAAATGGATGAAGCTTGCCAGAAAAAAACGTTCAGCCAAATTACTAGGGAGGCCGTCAGTCAACTTACTAAGGAGGCCGTGCAGACAAGTTACTAAGGAGGCCGTTCAGTCAACTTACTAAGGAGGCCGTTCAGTCAACTTACTAAGGAGGCCGTGCAGACAAGTTACTAAGGAGGCCGTTCAGTCAACTTACTAAGGAGGCCTTTCAGTCAAGTTACTGGGAGCACTGCCACAAAAACAGCCCAAGCTGCCAGTAGCATCTCCACTGAACCCTGTGCCTCGTGTAAATAATATATAATTATAACAAGTGTTTATTCACAACCGCAGAGAATTATATTTTGTTTCACCTCTTGACAcctcttgcacacacacacacacacaatatcatacgcactatatacacacacacacacacacacaatatcatacacactatacacactatacacacacacacacacacacacacacacacaca

Function

NR:

description
stathmin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052674.1 True 782 mRNA 0.51 3 77301460 77304319

Neighbor

gene id symbol gene type direction distance location
helz2a helz2 coding downstream 25575 77249952 ~ 77275885 (-)
LOC110529033 LOC106583621 coding downstream 70395 77218060 ~ 77231065 (-)
LOC110528532 fndc11 coding downstream 104321 77187663 ~ 77197139 (-)
si:ch73-267c23.10 LOC106583622 coding downstream 155738 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 189533 77106141 ~ 77111927 (-)
LOC110528536 arfrp1 coding upstream 44759 77349078 ~ 77355461 (-)
LOC110529034 LOC106583646 coding upstream 76435 77380754 ~ 77390369 (-)
LOC110528538 LOC106583648 coding upstream 100569 77404888 ~ 77463817 (-)
LOC110528539 LOC106583647 coding upstream 168384 77472703 ~ 77527363 (-)
LOC110528541 snta1 coding upstream 570293 77874612 ~ 77948295 (-)
G649997 NA non-coding downstream 89153 77211931 ~ 77212307 (-)
G649994 NA non-coding downstream 94719 77205121 ~ 77206741 (-)
G649991 NA non-coding downstream 98726 77202394 ~ 77202734 (-)
G649985 NA non-coding downstream 105575 77195544 ~ 77195885 (-)
G649984 NA non-coding downstream 106447 77194542 ~ 77195013 (-)
G650044 NA non-coding upstream 75137 77379456 ~ 77380682 (-)
G650057 NA non-coding upstream 97243 77401562 ~ 77401987 (-)
G650058 NA non-coding upstream 107073 77411392 ~ 77411620 (-)
G650062 NA non-coding upstream 110705 77415024 ~ 77415235 (-)
G649684 LOC100136508 other downstream 284859 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 1080529 76214701 ~ 76220931 (-)
G649025 NA other downstream 1680523 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2193544 75106897 ~ 75107924 (-)
G646073 NA other downstream 3490003 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 724925 78029244 ~ 78029753 (-)
G650763 NA other upstream 738980 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 971829 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2149756 79454075 ~ 79457103 (-)

Expression


Co-expression Network