Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528602 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 81298907 ~ 81299848 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cytochrome c oxidase assembly protein COX14 homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021610734.1 | False | 549 | mRNA | 0.44 | 2 | 81298907 | 81299743 |
| TU743618 | True | 650 | lncRNA | 0.44 | 2 | 81298911 | 81299848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528585 | LOC106583707 | coding | downstream | 575389 | 80650590 ~ 80723518 (-) |
| LOC110528589 | LOC106583709 | coding | downstream | 686121 | 80558564 ~ 80612786 (-) |
| LOC110529043 | LOC106583712 | coding | downstream | 945901 | 80261240 ~ 80353006 (-) |
| LOC110528575 | LOC106583691 | coding | downstream | 1131628 | 80152879 ~ 80167279 (-) |
| LOC110528574 | LOC106583691 | coding | downstream | 1170717 | 80111773 ~ 80128190 (-) |
| LOC110528600 | LOC106566189 | coding | upstream | 1793 | 81301536 ~ 81313006 (-) |
| tma7 | NA | coding | upstream | 51467 | 81351210 ~ 81353282 (-) |
| LOC118965322 | LOC106583721 | coding | upstream | 123389 | 81423132 ~ 81430600 (-) |
| LOC110528605 | grip2 | coding | upstream | 366943 | 81666686 ~ 81992596 (-) |
| sec13 | sec13 | coding | upstream | 821595 | 82121338 ~ 82132214 (-) |
| G654361 | NA | non-coding | downstream | 35486 | 81262793 ~ 81263421 (-) |
| G654337 | NA | non-coding | downstream | 75045 | 81223644 ~ 81223862 (-) |
| G654325 | NA | non-coding | downstream | 90094 | 81208582 ~ 81208813 (-) |
| G654320 | NA | non-coding | downstream | 105167 | 81193175 ~ 81193740 (-) |
| G654225 | NA | non-coding | downstream | 114524 | 81177609 ~ 81184383 (-) |
| G654390 | NA | non-coding | upstream | 9482 | 81309225 ~ 81309428 (-) |
| G654387 | NA | non-coding | upstream | 28692 | 81328435 ~ 81346154 (-) |
| G654414 | NA | non-coding | upstream | 80162 | 81379905 ~ 81380490 (-) |
| G654488 | NA | non-coding | upstream | 98925 | 81398668 ~ 81399353 (-) |
| G653977 | NA | other | downstream | 518216 | 80778760 ~ 80780691 (-) |
| G653274 | NA | other | downstream | 951340 | 80345802 ~ 80347567 (-) |
| rab22a | rab22a | other | downstream | 1254203 | 80025960 ~ 80046659 (-) |
| G653015 | NA | other | downstream | 1355179 | 79943201 ~ 79943728 (-) |
| G655289 | NA | other | upstream | 215794 | 81515537 ~ 81516722 (-) |
| G655297 | NA | other | upstream | 236814 | 81536557 ~ 81537098 (-) |
| G655316 | slc6a6 | other | upstream | 322660 | 81622403 ~ 81651265 (-) |
| G655387 | NA | other | upstream | 453812 | 81753555 ~ 81753966 (-) |
| G655433 | NA | other | upstream | 532935 | 81832678 ~ 81833031 (-) |
