LOC118965322 (LOC106583721)


Basic Information

Item Value
gene id LOC118965322
gene name LOC106583721
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 81423132 ~ 81430600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052680.1
TGTAAAGTGTATTGTAATGTAAAGTGTATTGTAATGTAAAGTGTATTGTAATCTAAAGTATATTGTAATGTAAAGTCTATTGTAATGTAGTGTTTTGTTATTTCAGGTGTCCTGGCCCAGGAGAACATAGTGGGAGACCCTCATGCTCAGGGATCCTCCTACATCGCTGCTTCCTATGTAAAGTACCTGGAGAGTGCTGGAGCCAGGGTTGTCCCCATAAGAATAAACAGAATCGATGAAGAGTATGAGAAGATATTTAACTCAATAAACGGGCTGCTGCTACCAGGTGGGGGTGTAGATCTGCAGACTTCCCAGTTCAGTCGTCTGTCAAAGATTTTCTGTGATCTGGCTATCAAGACCAACTGATTACTTCCCCATATGGGGCATGTGCCAGGGCCTTCAGCAGATGACAGTACTGACCAGCAACAAGAACCTTCTGACTCCGACAGAGACCAAGGCTGTGGCCCTGCCTTTCACATTCACCCCAGCTTCCATGAAAAGCCGCCTGTTCAAGGCCTTTCCCAGAGACCTGCTCCTGTCTCTGTCAGAAGACAACATCACCTCCAAGTTCCACAGCTGGAGTCTATCGCTACAGCGAATCGCTATCCGTTCTATGCTGTCCAGTGGCACCCTGAGAAGAGTCCCTTTGAGTGGGTAGATAAACCAGGCATGGTCCACTCTGCTGCCTCCGTCAGAGCATCCTTCTACACAGCACACTTCTTTGTCTCCGAGGGTGAGTTATTTTAGTCCACTTTCCTTTAaccaggcaaatcagttaagaacaatttcttatttgcAACGGTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGACTGTACAACGCTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGACTGTACAACGCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGCCTGGTGAGTGACTATAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGCCTGGTGAGTGACTATAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGCCTGGTGAGTGACTATAGATGACAGTCCAGTTGTTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATTAGTTATTGGACTGTACAACGCTGGCCTGGTGAGTGACTGTAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGTCTGGTGAGTGACTATAGATGACAGTCCAGTTGTTGGATTGCACAACTCTGGCCTGGTGAGTGACTGTAGATGACAGTCCAGTTGTTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTAGATGACAGTCCAGTTGTTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGCCTGGTGAGTGACTGTACAAACCTGGCCTGGTGAGTGACTGTAAATGACAGTCCAGTTGTTGGATTGTACAACTCTGGCCTGGTGAGTGACTGTACAACTCTGGTCTGGTGAGTGACTGTAGATGACAGTCCAGTTGTTGGATTGTACAACTCTGGCCTGGTGAGTGACTATAGATGACAGTCCAGTAATTGGATTGTACAACTCTGGCCTGGTGAGTGACTGCAGATGACAGTTCAGTTATTGGACTGATGTGATTTCAAGTCTTGAGAACTTTGTGTggtttaaaaaacaaataaaacgtTTATTTAAATGTACTACCATTGGATGTTATGATGCAGTGTTTTATTAATGGGAAAATATGTAAATTCTCCCATCTTCCATGTAAAAACCATTACAACAACATGGCTGGAACATCTGAAAATATAACGAAACTGCCTGCACAAATCTGTATGAAATCAGGGTTTTTTTCTGCACAGAAAAGTTCTGGCCTAAAGGTTTTTTCAGTCCGCCTATCTCCAATAATTCCCGGAATGGTAAAACGTTTTTGAGTGTAAACTTAAAACAACTTAAACCAGATCTAAAGTTTATTGGAAAGATAGCAGACTTATATATTTATCTATAAGAACTTAACAATCACCACAATAACAGTCAGGGAGAATTTTAAATTCCCAAATTGATGCATTCAGGAGTATTTTTGTCATGgcatggggcccccattgattttgttatcgTTTTTTGAGTCACTCACATAGCACAAGCCATGTCAAATTGTTTTTATAACTGAAACATTTTATCTCCGTtacatggcaaaatgtgaagaatttGCTTTATAACAGTCACACCCACCACCTAAGCCCCATTTGGATCCAGAAAAAACTCTGGAAATACATTGATAGCACATTTTAGTGCTACCACAATAGTGTTTTTTATTGTTTACTCACCCATGTGTCAAACTAATGCTGCTATttctattgacttggccaaagcttttgatacggtagaccattctaTTCTTGTGGGCCAACTAAGGAGTATtgttgtctctgaggggtctttggcctggtttgctaactacctctctcaaagagtgcagtgtaaaAAGTCATagaatctgctgtctcagccactgcctggcaccaa

Function

NR:

description
gamma-glutamyl hydrolase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052680.1 True 2840 mRNA 0.44 6 81423132 81430600

Neighbor

gene id symbol gene type direction distance location
tma7 NA coding downstream 69850 81351210 ~ 81353282 (-)
LOC110528600 LOC106566189 coding downstream 110126 81301536 ~ 81313006 (-)
LOC110528602 NA coding downstream 123389 81298907 ~ 81299848 (-)
LOC110528585 LOC106583707 coding downstream 699614 80650590 ~ 80723518 (-)
LOC110528589 LOC106583709 coding downstream 810346 80558564 ~ 80612786 (-)
LOC110528605 grip2 coding upstream 236086 81666686 ~ 81992596 (-)
sec13 sec13 coding upstream 690738 82121338 ~ 82132214 (-)
LOC110528607 LOC106566201 coding upstream 714668 82145268 ~ 82152444 (-)
LOC118965368 NA coding upstream 1428781 82859381 ~ 82860786 (-)
LOC110525201 LOC106583753 coding upstream 1442109 82872709 ~ 83038973 (-)
G654488 NA non-coding downstream 23779 81398668 ~ 81399353 (-)
G654414 NA non-coding downstream 42642 81379905 ~ 81380490 (-)
G654387 NA non-coding downstream 76978 81328435 ~ 81346154 (-)
G654390 NA non-coding downstream 113704 81309225 ~ 81309428 (-)
G654513 NA non-coding upstream 16835 81447435 ~ 81450615 (-)
G654523 NA non-coding upstream 38546 81469146 ~ 81469417 (-)
G654547 NA non-coding upstream 67094 81497694 ~ 81497937 (-)
G654556 NA non-coding upstream 74232 81504832 ~ 81505471 (-)
G655284 NA non-coding upstream 80228 81510828 ~ 81555995 (-)
G653977 NA other downstream 642441 80778760 ~ 80780691 (-)
G653274 NA other downstream 1075565 80345802 ~ 80347567 (-)
rab22a rab22a other downstream 1378428 80025960 ~ 80046659 (-)
G653015 NA other downstream 1479404 79943201 ~ 79943728 (-)
G655289 NA other upstream 84937 81515537 ~ 81516722 (-)
G655297 NA other upstream 105957 81536557 ~ 81537098 (-)
G655316 slc6a6 other upstream 191803 81622403 ~ 81651265 (-)
G655387 NA other upstream 322955 81753555 ~ 81753966 (-)
G655433 NA other upstream 402078 81832678 ~ 81833031 (-)

Expression


Co-expression Network