LOC110528625 (LOC106583755)


Basic Information

Item Value
gene id LOC110528625
gene name LOC106583755
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 83731185 ~ 83735497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984239.1
TTGTAGAtcagcctttttaaaactcagcTTTGATGGCTTGTATCTGCACTGTTTACGTGTATGTAGGAATCCAGAAGCATATTTTAGCCTGTTCCAATCTTGGGTTCTGTTGACAGAGGAGCAAGACAAACACAGTCAAGACTACAATCTGGTGGTAGCCTGCACAAGAAGGTTGGCCATGGGTGGAAAGGGCTTCCTAGGATGTTTCATCCTGTTTATGTCTCTGGCTTCAGTATCCACTATCAAACAAACCCTTATTTCAATACATGACCTCAGGGGCATAGAGTTTGGCCACACTTTTCCTCGACATGGCCTGATGCTGCTCCACTGGCTAGCCAACAACATTCACACTGACAACAACGGCAACATGAGACTCAATTTCAACCCAACTAGGGGAGACTATGGCTTTAATTTCTATGGAAACGCTGACAGACCCCGCCCATTACCTTTTCTGCCCTCTGAAAGTGGAAGTTACTACTCATTAGGGAATATTGATGGAAATTACAACTATAATGGCGCTACGGCACTTCCTGATTATGTCACTCAAAGCTTCTACAACTCATGGATacctgagagaaacagagacagagtcaTGAGAGTTAGGGAGGAAGGATCCAATCAGCTCATAGTAGATGAGGTCTACATCACACAGCATTACCCGCCAAATGAAAACAGAGGAAGTGTCTATGATCCAGACAATACATACCCTGTCAGTTTCAGCCTCTTAACACAAATCCAAGTTCTCCCAACCATTACACGAGATGTAATTCAACGAATACACAATGTAGAGATCAACGACAACAGCGTGGAGAACATCTGGGGACACACACCTGGGCTGGCACTTCTTTTGGCAATTGCATTGTACTTGGCACGTCCCAAGGTCTCATTTATACAGCAAGTGTTTATTACCATGGAAAGCCAGCATCACATGCAGGATGATGAAACTAAATCGATAAAGCTTGAGGTGAAAACCACAAATAGAGGAGGTGCCAGGATCACCTTCAGTGGTATCCCCAAGAGCCTTTTGGACAAGGGTGTGATTTGTGCGCTTTATAAGAACAATGACAGTATGGACATGCTAGACTCTTCCTCAGTCATAGACGGTGCCTCTGGGTCCTTTGACACCTCAGTACCCCTCAACCCTGGTCTCCAGGCCAGGCTTCATCCGCACAAATCAATGTGGCTTTTTAAATTATGCGGGAATTACAACACATCTGAGGAGGAAATACGTAGGAGTTCTGAGTTTCATGATTCCAACAGAGAGATTCCTGTTGATATAAGCGGCTATAAGCCTAACGCCAGTCTGCAGCTCTTCGTAAAGGATGGAAAGGCCTGTGCTCGCCTGTATGTGAAAAAGTCCTTCACTGACTGGAAGAAGAAGTTTAATAACTCCTGGGTTGGGTTTTACTCTTCAGAAAAAAACAACACCAATGAATATAATACCTACCAATGGCAATGGGCTGTGAAGTTTTCTGAGGAAAGCCGCTCAGATTGGAAAGATATACCTGAGTATGACGTCTATGTGTACAGGTCTAGTATGCCCATGTCTCCTGGGGTCCAGGCCCGATTCATGCTGGAGAAATCTGGGGGTGAAAAGGCACGCACTCCACCCTGGGAGGTACATACATCAGCAATTTAAAGCACACAACTTTTTACTGGTACGTGCTTTTGTCCATTGTGTTTAGCCGGGTTCTTACATGCCCATCCTCTGCTTATTGTTAATGGATTATTATCTATGGGATTTTTCATCCTGTTTCGTATTGATTACATATGCCATTGATATTATCATTGATATCTAATTGTGTAATTGTCTCCGTCCATTTTTGTTTGTCATTTCTGAACCCTGCTTGTCCTTTTTATTGATTGATTTGAATTGCTAATCTGTGCAgagtgtaaaaataaaaatataaagaaTCTGACCTCAATAAACTATTGATGAAATTGAAGTGAAAACACAATA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583755

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984239.1 True 1960 mRNA 0.43 2 83731185 83735497

Neighbor

gene id symbol gene type direction distance location
LOC118965325 NA coding downstream 170767 83559538 ~ 83560418 (-)
LOC118965369 NA coding downstream 674753 83056001 ~ 83056432 (-)
LOC110525201 LOC106583753 coding downstream 692212 82872709 ~ 83038973 (-)
LOC118965368 NA coding downstream 870399 82859381 ~ 82860786 (-)
LOC110528607 LOC106566201 coding downstream 1578741 82145268 ~ 82152444 (-)
stl3 stl3 coding upstream 152947 83888444 ~ 83905266 (-)
LOC110528630 stl3 coding upstream 178374 83913871 ~ 83917114 (-)
LOC110528632 LOC105007334 coding upstream 218698 83954195 ~ 84332909 (-)
LOC110529055 rnf123 coding upstream 1108834 84844331 ~ 85106696 (-)
LOC110528641 terf2ip coding upstream 1371474 85106971 ~ 85119900 (-)
G656707 NA non-coding downstream 34571 83641891 ~ 83696614 (-)
G656719 NA non-coding downstream 68818 83660364 ~ 83662367 (-)
G656661 NA non-coding downstream 184453 83546530 ~ 83546732 (-)
G656655 NA non-coding downstream 192953 83537970 ~ 83538232 (-)
G656479 NA non-coding downstream 226893 83449028 ~ 83504292 (-)
G656793 NA non-coding upstream 25779 83761276 ~ 83763112 (-)
G656802 NA non-coding upstream 48062 83783559 ~ 83783830 (-)
G656806 NA non-coding upstream 51434 83786931 ~ 83788200 (-)
G656807 NA non-coding upstream 53489 83788986 ~ 83789254 (-)
G656809 NA non-coding upstream 58560 83794057 ~ 83794290 (-)
G656671 dag1 other downstream 115187 83608532 ~ 83615998 (-)
G656314 NA other downstream 403005 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 1397887 82328398 ~ 82333651 (-)
G655651 NA other downstream 1504640 82225952 ~ 82226545 (-)
G655469 NA other downstream 1815675 81914708 ~ 81915510 (-)
G658255 NA other upstream 1271229 85006726 ~ 85007505 (-)
G659250 NA other upstream 2424745 86160242 ~ 86160923 (-)
G659543 NA other upstream 2896910 86632407 ~ 86633856 (-)
G659824 NA other upstream 3268239 87003736 ~ 87007292 (-)

Expression


Co-expression Network