LOC118965371


Basic Information

Item Value
gene id LOC118965371
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 84372197 ~ 84401519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984465.1
atgtTCTCCGTTTTGCACTACGGCCCCCTGAAGAGTCAcggggactcgtctgaagtcctTACAGCCTCTTCGGCCAAACAGTTTGGGcaacacactaatatgacccctctgtggaaagccctgccaggccccagcaccaaccTACCAGCTCCAGCACCAACCTGCCAGCCCCAGCACCAACCTGCCAGCCCCAGCACCaacctgccaggccccagcaccaaccCTGCTAGGTCCCAGCACCaacctgccaggccccagcaccaaccTACCAGCTCCAGCACAAACCTGCCACGCCCCAGAACCAACCCTGCTAGGTCCCAGCACCaacctgccaggccccagcaccaacctaccaggccccagcaccaaccCTGCCAGGACCCAGCACCAACCCTGCCAAACCCCAGCACCAACCCTGCCTGgccaggccccagcaccaaccCTGCCTGGCTAGGCCCCAGCACCATTCCAGCCCTGCATAGCATGAGCTCAGACACGGACCTGCCCAGTTCTTATGCCAGCACCAGCTCACCCTTGCCCAGTAATGCCATTGCTAGCTGTGGACTACCAACTCCAGAGGACATCTAG

Function

NR:

description
PREDICTED: SH3 domain-containing protein C23A1.17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984465.1 True 588 mRNA 0.62 2 84372197 84401519

Neighbor

gene id symbol gene type direction distance location
LOC110528627 stl3 coding upstream 490611 83878342 ~ 83881586 (+)
LOC118965393 NA coding upstream 569597 83800611 ~ 83802600 (+)
nicn1 nicn1 coding upstream 589732 83759738 ~ 83782465 (+)
LOC110529053 LOC106583755 coding upstream 659994 83711361 ~ 83712203 (+)
dag1 dag1 coding upstream 756154 83554283 ~ 83616043 (+)
amigo3 amigo3 coding downstream 503109 84904628 ~ 84909361 (+)
LOC110528638 NA coding downstream 892709 85294228 ~ 85297684 (+)
LOC110528636 LOC106583767 coding downstream 900035 85301554 ~ 85363683 (+)
pusl1 pusl1 coding downstream 1150274 85551793 ~ 85617931 (+)
tamm41 tamm41 coding downstream 1229459 85630978 ~ 85648641 (+)
G657103 NA non-coding upstream 95379 84274571 ~ 84276818 (+)
G657077 NA non-coding upstream 135355 84236350 ~ 84236842 (+)
G657057 NA non-coding upstream 175940 84192654 ~ 84196257 (+)
G656976 NA non-coding upstream 286556 84085132 ~ 84085641 (+)
G656940 NA non-coding upstream 355224 84016506 ~ 84016973 (+)
G657240 LOC106562530 non-coding downstream 127435 84528954 ~ 84529798 (+)
G657251 NA non-coding downstream 144658 84546177 ~ 84548123 (+)
G657292 NA non-coding downstream 216588 84612829 ~ 84618717 (+)
G657308 NA non-coding downstream 256220 84657739 ~ 84658261 (+)
G657370 NA non-coding downstream 356621 84758140 ~ 84758689 (+)
G656551 NA other upstream 811679 83558837 ~ 83560518 (+)
G656264 NA other upstream 1099988 83267148 ~ 83272209 (+)
G656125 NA other upstream 1215878 83156014 ~ 83156319 (+)
G655042 NA other upstream 1912530 82459085 ~ 82459667 (+)
G654782 NA other upstream 2420805 81951002 ~ 81951392 (+)
G657228 NA other downstream 102030 84503549 ~ 84520418 (+)
G657254 NA other downstream 150477 84551996 ~ 84554773 (+)
G657481 NA other downstream 604960 85006479 ~ 85007498 (+)
G658885 NA other downstream 1485073 85886592 ~ 85887121 (+)

Expression


Co-expression Network