Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110511195 |
| gene name | LOC106583764 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 85392855 ~ 85551720 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036984261.1 | False | 5308 | mRNA | 0.49 | 26 | 85392855 | 85551719 |
| XM_036984260.1 | False | 5312 | mRNA | 0.49 | 26 | 85392855 | 85551720 |
| XM_036984262.1 | True | 6254 | mRNA | 0.47 | 24 | 85401070 | 85551717 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ube2j2 | ube2j2 | coding | downstream | 4787 | 85375594 ~ 85388068 (-) |
| LOC110529054 | ip6k1 | coding | downstream | 121665 | 85201159 ~ 85271192 (-) |
| gmppb | gmppb | coding | downstream | 208201 | 85171118 ~ 85184654 (-) |
| LOC110528639 | LOC106583772 | coding | downstream | 222883 | 85141224 ~ 85169972 (-) |
| LOC110528641 | terf2ip | coding | downstream | 272955 | 85106971 ~ 85119900 (-) |
| LOC118965326 | NA | coding | upstream | 6187 | 85557907 ~ 85558332 (-) |
| atg7 | atg7 | coding | upstream | 212918 | 85764638 ~ 85855852 (-) |
| hrh1 | hrh1 | coding | upstream | 304969 | 85856689 ~ 85864549 (-) |
| LOC118965394 | NA | coding | upstream | 453128 | 86004625 ~ 86007056 (-) |
| slc6a1b | slc6a1 | coding | upstream | 965774 | 86517494 ~ 86549674 (-) |
| G658665 | NA | non-coding | downstream | 35718 | 85356690 ~ 85357137 (-) |
| G658656 | NA | non-coding | downstream | 49504 | 85339584 ~ 85343351 (-) |
| G658652 | LOC106583767 | non-coding | downstream | 55212 | 85332936 ~ 85337643 (-) |
| G658638 | NA | non-coding | downstream | 85232 | 85305371 ~ 85307623 (-) |
| G658624 | NA | non-coding | downstream | 87675 | 85304179 ~ 85305180 (-) |
| G658716 | NA | non-coding | upstream | 7281 | 85559001 ~ 85560774 (-) |
| G658755 | NA | non-coding | upstream | 29322 | 85581042 ~ 85582030 (-) |
| G658760 | NA | non-coding | upstream | 34669 | 85586389 ~ 85590860 (-) |
| G658781 | NA | non-coding | upstream | 56242 | 85607962 ~ 85615226 (-) |
| G658762 | NA | non-coding | upstream | 65813 | 85617533 ~ 85618534 (-) |
| G658255 | NA | other | downstream | 385350 | 85006726 ~ 85007505 (-) |
| LOC110528632 | LOC105007334 | other | downstream | 1436087 | 83954195 ~ 84332909 (-) |
| G656671 | dag1 | other | downstream | 1776857 | 83608532 ~ 83615998 (-) |
| G656314 | NA | other | downstream | 2064675 | 83327479 ~ 83328180 (-) |
| G655715 | LOC106583745 | other | downstream | 3059557 | 82328398 ~ 82333651 (-) |
| G659250 | NA | other | upstream | 608522 | 86160242 ~ 86160923 (-) |
| G659543 | NA | other | upstream | 1080687 | 86632407 ~ 86633856 (-) |
| G659824 | NA | other | upstream | 1452016 | 87003736 ~ 87007292 (-) |
| LOC110528667 | cenpp | other | upstream | 1733181 | 87114104 ~ 87293966 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 2701343 | 88253063 ~ 88345745 (-) |
