si:dkeyp-87e7.4 (LOC106583812)


Basic Information

Item Value
gene id si:dkeyp-87e7.4
gene name LOC106583812
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87410180 ~ 87425169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610805.2
ATCCAGGTTCCTTTTTTCCCCCCCATCTAAAGCCCCGCCTCTTGTAACTGACTGTCAATTCGCACCACTGTTGTTGCAGCCATTTTAATCTACACTTCAGTTGTAACTACACCGACTGATGCTTGCTTAGGACCGTAGGAAGggtgaagagaaagactGACTTCAGGAGCTCTCAATGGTTTCACCTGAAGGCAGATGTCATGAATTACACAGAACCGGTTGTGGAGAAGGCCGTCAACTCCTGGTCCAGAATAGCCTCAGCGGGACAGACTGTCCTTTTCGAGGCGTTACAGATCCTCAACCCTATGTCGAAAGATCTTTCAGACACCGAGGAACTGGTATCCTTTGTGCAGGGACTTAAGGAAGAGGGCCATAAGCCCAAAGTGCTACGGAGCAAAGATGTGTACGGTTACAGGTCATGTACAGCGAAAACCCTCCCGGAAGACACGTGCTCTATGGACGTAGCCAGCAAGGGTCCAAGGCCAGGCAAGAAGAGGGGACGGAAGAGtaagaagaaaaagaaaagaaaggagTGTAACAATTACGCATCGTGGAGTAGTGCATCAGAATCTCACAAGAGATCTGTCTTTTCCAGACCTCCGATTCTGACTATGCATCCTGCCCAGGTGCAGCAGCAGTACCTGAAACTAACGAACGTTACAGGTTTAACGAGAGGTCACGCTGCGAGAATGCAGATTCACTCTCAACCTCCAACACTTTCGGGAATACCGGTACTGCCGTCGCCGAACACGGGTAGAACACCCAAAGCTGTGGCCATGGTTGGTCAAAGGTACCATGCCTCCTGTCCGGAATGGAACAGAGCCCTTATCGGCGATTCTGCCCCCGTGATCTATGGGAACGGCCGAGGAGTTTACAACTACAAGACTGATGTGTCAAACCACAGACGGTCCTGGACGGATGACCAATCTCTGTGGATGATGAACCGTCAGGAGGAGTGTCGGCTGGACGGGAACAGTTTGAGGTGGAAGGTGATCAAAGTGGACGATTGCGTCACGGTTGAGGAACTGAGAAGGAAGGCCCAGAGGATCTTACAGGTGAACCTGTCCCCTGTGATACAGATACGCCCGCTGTATGAAACTCTAGCTGAATACCAGCGTGAACGATATCTCCAGTAACTTCTTGGTTTAGCCTAGGGTCCATTTTGCAACGAGGCTTAGCGAAGTCCACAGAGGTCTTTCTTTACTGTTGAagccagagggaaaaaaaacatcaGGACGGCGTCATCTGACTGACGACAGTAAAGTACGTTCCTTGAGCAGAGGGGATGATGTCACGACTACCGCGTCAACAAGACTGAAGGGCCTAACGTCGATCAGAAGTTATACACGGTGCTGATTTCAGACACTCAAGCATAGACATTACTGGTCAGAATgtaaatttgtatttttttgttttgttttaaccaGCTTCTGTTTTGTACACTTCTGTTTTGTACACTTCTGTTTTGTACACTTGAGGATGGACTGATAGACTTGGTAAGCAGTGTCACGGCACACTGTAGGATACATTTTTGGTTTGTTGCAATAATTTTTTTAGGTACAGTCTACATGACAATTTTTAAAACAATTTGGTCCCCTGAAATTGTTGTAAATGGGCACCCTTGTTTTCAGGGTTATTGTTTTACAGCTTGATTTTTAGGTCTTCCTGTGTTTGGCCTACTGAGCCATTTATCCCTTTAATCTACTTTTGTGTTTCCTCTTTTCTAGAGTTTGAACTTTCGGGAGCCTCTAAATGTTTGCTGAATGTAAAGCACTCAGATCGTAACAACTCCATTTGCAGGGCAGAGTTAAATTGGCCTTGTTCTTTTcagtaaacctaacccttttTGTAGTGACTGATTTTTATTTTCTCTGAGTAAAGAATTTGAAACCACCCTAttcttgtattattatttttttttaaaccttgatTTTGCCAAACTTTCCAGCAAACCGATATTAACTTTGACTCTGTCGTAGATCTGGTGCAAACTGCCCATCGGTACTAACTGGTAAATCGGTGAAAGTGCACAGTAAACTAAAGCTGTCCGTTTTGTGTAGAAGTTGCCACGGTGTTTTGTGATCTTTCATTAGTTCAGTTGACTGGTTTCTGATGCGCTCCTTCAATGGTTACTTTAAGTTAGACACGTTGTATTGTAGTGGCACAGTCAATCAAGGGTACTTCACAGGGACTGTTATCGGCCACGTCCCAAACAGCACCATGTTCCCTTTACactagtatagggaatagggtcccaatTTGAGACTCGCCCTTCATGTTGGTTTAACCTCTcttactgtatttttttttttttttttttttgtgccaaACATGTCGTTGGTGCTCTCTGTTAGGCCACATGATACGATTCACTGTTCTGATTGGATAGCTGCCTCTTCATCCCGCCTCAACTCTGGATTTAATTGGTGCATTGTTTTTTTGTTGCCAATTTCACCATCCCAGAAGTTGCAAACATTTTAGGCCAAAACTACAGTCTAATTAATTAAGGAACTGGTTAAGTTGAATGATTTGTCAGGTTTATTGTAAGTGAAGAGTTTTTTTTTGTTCAAATTGCTTGAATCGTCATGTTGTAGCCCAAAATCAGGGCCTTTTTAAATGGATAATTTGTTGCCATATGCTGAAAATACCATAAATATGACTGAATGGTTGTGTTCAAGCCAGGGACCAACCAGTCGTTGTGATTGCCGAAGGGGAAGTTAATAAGAGCAGATTGGTATGGCTGTAACGTGTCTTTTCACCCCGTTTATTATTCATCTTTATTTCATTGTACCGGTATGAAATAAAATCACGAGGTGAGCATGGCTGTCTCTTTATAAAGCCTAGTTTATGCAACGCAAAAACACAATTAGTTACTTAAAATGGCATTACCTGAGTTTGCAGGGCTCCACATGTTTGCCGAAGGACCCAGAATGGCCATTTTGCGTAAGGTATGCATTAGGATAAAGTCTAGAGTCCCCTGGTCACATGATAGTGATCAATTTATGCAGGTTCTCAACTATTTATTTTGTATCCTAACAGATGTGTCCATTTCTTGcagttttgattttttttttgagtCTTATTGGATAATTTTCAGAAATTGTTTAATAAAATATCTTCAAGGACTAATTTAA
>TU750789
TGTTTTGtacgCTTCTGTTTTGTACACTTGAGGATGGACTGATAGACTTGGTAAGCAGTGTCACGGCACACTGTAGGATACATTTTTGGTTTGTTGCAATAATTTTTTTAGGTACAGTCTACATGACAATTTTTAAAACAATTTGGTCCCCTGAAATTGTTGTAAATGGGCACCCTTGTTTTCAGGGTTATTGTTTTACAGCTTGATTTTTAGGTCTTCCTGTGTTTGGCCTACTGAGCCATTTATCCCTTTAATCTACTTTTGTGTTTCCTCTTTTCTAGAGTTTGAACTTTCGGGAGCCTCTAAATGTTTGCTGAATGTAAAGCACTCAGATCGTAACAACTCCATTTGCAGGGCAGAGTTAAATTGGCCTTGTTCTTTTcagtaaacctaacccttttTGTAGTGACTGATTTTTATTTTCTCTGAGTAAAGAATTTGAAACCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610805.2 False 3134 mRNA 0.43 2 87410180 87422713
TU750789 True 450 lncRNA 0.37 3 87411418 87425169

Neighbor

gene id symbol gene type direction distance location
wu:fb55g09 cl012 coding downstream 67515 87341189 ~ 87342665 (-)
LOC110528667 cenpp coding downstream 116214 87114104 ~ 87293966 (-)
LOC118965396 NA coding downstream 350316 87058268 ~ 87059864 (-)
atrip atrip coding downstream 356306 87007438 ~ 87053874 (-)
LOC110528663 LOC106583798 coding downstream 443188 86944797 ~ 86966992 (-)
LOC110528674 pdhb coding upstream 54676 87477389 ~ 87494213 (-)
pxk pxk coding upstream 72673 87495386 ~ 87555025 (-)
rpp14 rpp14 coding upstream 132577 87555290 ~ 87565881 (-)
LOC110528675 rpp14 coding upstream 132583 87555296 ~ 87556594 (-)
abhd6a abhd6 coding upstream 145082 87567795 ~ 87603202 (-)
G660072 NA non-coding downstream 2143 87407813 ~ 87408037 (-)
G660070 NA non-coding downstream 15954 87393976 ~ 87394226 (-)
G660065 NA non-coding downstream 16923 87392943 ~ 87393257 (-)
G660067 NA non-coding downstream 19271 87390400 ~ 87390909 (-)
G660066 NA non-coding downstream 20297 87389590 ~ 87389883 (-)
G660081 NA non-coding upstream 5689 87428402 ~ 87428640 (-)
G660396 NA non-coding upstream 71617 87494330 ~ 87573682 (-)
G660397 NA non-coding upstream 78702 87501415 ~ 87503211 (-)
G660406 NA non-coding upstream 85809 87508522 ~ 87509362 (-)
G660435 NA non-coding upstream 166723 87589436 ~ 87589957 (-)
G659824 NA other downstream 402888 87003736 ~ 87007292 (-)
G659543 NA other downstream 776324 86632407 ~ 86633856 (-)
G659250 NA other downstream 1249257 86160242 ~ 86160923 (-)
G658255 NA other downstream 2402675 85006726 ~ 85007505 (-)
LOC110528687 LOC106583825 other upstream 830350 88253063 ~ 88345745 (-)
G661128 NA other upstream 1336780 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 1630363 89053076 ~ 89061481 (-)
G661335 NA other upstream 1674334 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 2035438 89458151 ~ 89459700 (-)

Expression

si:dkeyp-87e7.4(LOC106583812) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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si:dkeyp-87e7.4(LOC106583812) Expression in each Bioproject

Bar chart with 21 bars.
si:dkeyp-87e7.4(LOC106583812) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network