XLOC_002501 (CABZ01066320.2)


Basic Information

Item Value
gene id XLOC_002501
gene name CABZ01066320.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 1541263 ~ 1544095 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004673
GTGACGGGCAgcaaaaacatatgccagagtagttggcaattcattccgctgtggcgaaccctgataatAAGTGACTCAGCcagaggaaaatgaataaatgaataatgaaaataactgAGATGTTGTTTATTTGGACATTATTTACCTTGCTGAAAATGCTTTTGAACAGGTTTAGTTGTCGTCAGCAGCGATGagtgtaaatatgtgtgtgtttcaggtgtgtttgactctGAGTTGAGTGGACTGCCGTTGTTGGATAAAGCTTACGTGACGTCAGCTGAGCTTCACGCGTTTGCTTCGACACAGAAAAGACCTGCGGAGATCCAGGACGCCTCCACAAACACTGAAGCAGGTGTGTATGGAGCTACAAATATGACAAAACGAGCTCAGTTTGAATCGTGTTCATTTGAGAAACATGCTTACACTGTGACattcacacactcgtacactacaacCAGTTAAGTTCATCAATTCctcaatagcgcatgtgtttggactgtgggggaaacctgggaaggacacccacaccaacatggggagaacatgcaaactccacacagaaatgacaactgacccagccaggactcgaaacagcgactttcttgctttgcaggcaacagtgctgaccactgagccaccgtgccgccctattaaattataattgtgaataattcaaatgaacataACACAATTCAGATTCAGGTTATTTTGTCACATTTTTAGCTCCATAGTGTGGCTGGAGCAGTGTCTTACAGTTACCTCACTTCTGCTTTTGTTCACTGCAGATCCGCCTCGCTCCATCACAGATAAAGCCGTTTCTGTCCAGATTCCTCCATCTCCCAGCATGCCATCTGCTCCTGAAGGAGGACTGCTCGATGTTGCTCCAGTTGTTCCTCCAGACGTCTTCATGAACCTTCGGTACGCTAAAGAAAAACCATCAGACCAACCGGAGAACAGCAGCCGTCCAGAGTCAGATCATGGAGGAGTTACTGTGaGTCCTGAGGGACGGAGGTTCATCAATGTGGTGGATCTGACAGACGAGTCTCTTCTGGAGAATCTGCCTCAGTCTCCGCCCACATCTGCTCAACTCCACCTACTGGCAGCATCTGTCGTAAACCACGCCCCTAACCCCTCCCACACCTTCACCCCAAACACGCCTGAAGAGATTCCAGGTGCAGTCACAGTTCACAGAAATACAGAAGGGATTTTTTTAGGGCAGTTATATATAATCAGCAATATAt

Function

GO:

id name namespace
GO:0044424 obsolete intracellular part cellular_component
GO:0012505 endomembrane system cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0033596 TSC1-TSC2 complex cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117666

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004673 True 1241 lncRNA 0.46 3 1541263 1544095

Neighbor

gene id symbol gene type direction distance location
XLOC_002500 WDR70 coding downstream 17974 1434956 ~ 1523289 (-)
XLOC_002499 NA coding downstream 108123 1423241 ~ 1433140 (-)
XLOC_002498 opn4xa coding downstream 221149 1294463 ~ 1320114 (-)
XLOC_002497 pdlim5b coding downstream 265217 1187653 ~ 1276046 (-)
XLOC_002496 bmpr1bb coding downstream 360949 1082961 ~ 1180314 (-)
XLOC_002502 CABZ01066320.1 coding upstream 68 1544163 ~ 1552789 (-)
XLOC_002503 nup155 coding upstream 53175 1597270 ~ 1636452 (-)
XLOC_002504 NA coding upstream 122247 1666342 ~ 1667630 (-)
XLOC_002505 NA coding upstream 125049 1669144 ~ 1718637 (-)
XLOC_002506 NA coding upstream 134188 1678283 ~ 1741175 (-)
XLOC_002495 NA non-coding downstream 883857 657051 ~ 657406 (-)
XLOC_002492 NA non-coding downstream 993062 546202 ~ 548201 (-)
XLOC_002491 NA non-coding downstream 1119610 415997 ~ 421653 (-)
XLOC_002489 NA non-coding downstream 1182556 356555 ~ 358707 (-)
XLOC_002510 NA non-coding upstream 404002 1948097 ~ 1953459 (-)

Expression


Co-expression Network