Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528686 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 88120869 ~ 88127498 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052690.1 | True | 859 | mRNA | 0.46 | 3 | 88120869 | 88127498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il10 | il10 | coding | upstream | 62051 | 88054111 ~ 88058818 (+) |
| dennd6aa | dennd6a | coding | upstream | 109384 | 87966569 ~ 88011485 (+) |
| LOC110528683 | slmap | coding | upstream | 167373 | 87951429 ~ 87953496 (+) |
| LOC110528678 | dnase1l3 | coding | upstream | 462031 | 87647017 ~ 87658838 (+) |
| nisch | LOC106583810 | coding | upstream | 735546 | 87346077 ~ 87387283 (+) |
| LOC110528688 | LOC106583827 | coding | downstream | 111429 | 88238927 ~ 88241064 (+) |
| pdrg1 | pdrg1 | coding | downstream | 389937 | 88517435 ~ 88528083 (+) |
| LOC110528691 | LOC106583835 | coding | downstream | 651866 | 88777804 ~ 88781772 (+) |
| cass4 | LOC106583834 | coding | downstream | 663272 | 88790770 ~ 88852155 (+) |
| LOC110510506 | LOC106583833 | coding | downstream | 725598 | 88853096 ~ 88974945 (+) |
| G660598 | NA | non-coding | upstream | 36293 | 88082831 ~ 88084576 (+) |
| G660389 | NA | non-coding | upstream | 59657 | 88060856 ~ 88061212 (+) |
| G660378 | NA | non-coding | upstream | 85661 | 88034568 ~ 88035208 (+) |
| G660371 | pde12 | non-coding | upstream | 99084 | 88021002 ~ 88021785 (+) |
| G660321 | NA | non-coding | upstream | 105912 | 88011507 ~ 88014957 (+) |
| G660664 | NA | non-coding | downstream | 10165 | 88137663 ~ 88232319 (+) |
| G660670 | NA | non-coding | downstream | 33534 | 88161032 ~ 88194958 (+) |
| G660673 | NA | non-coding | downstream | 54456 | 88181954 ~ 88183712 (+) |
| G660674 | NA | non-coding | downstream | 55120 | 88182618 ~ 88196526 (+) |
| G660665 | NA | non-coding | downstream | 66828 | 88194326 ~ 88201195 (+) |
| G659706 | NA | other | upstream | 1018599 | 87100464 ~ 87102270 (+) |
| G659136 | NA | other | upstream | 1599047 | 86521060 ~ 86521822 (+) |
| G659058 | NA | other | upstream | 1708284 | 86408702 ~ 86412974 (+) |
| G658887 | NA | other | upstream | 2224720 | 85895826 ~ 85896149 (+) |
| G660790 | NA | other | downstream | 295266 | 88422764 ~ 88427927 (+) |
| G660853 | NA | other | downstream | 494815 | 88622313 ~ 88689342 (+) |
| G660886 | NA | other | downstream | 564396 | 88691894 ~ 88694076 (+) |
| G661162 | NA | other | downstream | 689587 | 88817085 ~ 88817655 (+) |
| G661172 | NA | other | downstream | 845486 | 88972984 ~ 88975830 (+) |
