Gene
RNA
| Item | Value |
|---|---|
| gene id | G566400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 248837 ~ 266014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU644683 | True | 243 | lncRNA | 0.34 | 2 | 248837 | 266014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510711 | LOC106575981 | coding | downstream | 40246 | 188244 ~ 208591 (-) |
| LOC110511225 | LOC106574981 | coding | downstream | 81512 | 150789 ~ 167325 (-) |
| LOC118965194 | LOC106574951 | coding | downstream | 119577 | 115364 ~ 129260 (-) |
| LOC118965196 | NA | coding | downstream | 170090 | 74758 ~ 78747 (-) |
| LOC110495590 | LOC106574982 | coding | downstream | 179737 | 61099 ~ 69100 (-) |
| LOC110517689 | LOC106598090 | coding | upstream | 32261 | 298275 ~ 321254 (-) |
| LOC110527261 | LOC106595203 | coding | upstream | 60389 | 326403 ~ 332021 (-) |
| LOC118965193 | LOC106593324 | coding | upstream | 76207 | 342221 ~ 385831 (-) |
| LOC118965330 | LOC106575882 | coding | upstream | 103639 | 369653 ~ 372114 (-) |
| LOC110515905 | LOC106592870 | coding | upstream | 127077 | 393091 ~ 403332 (-) |
| G566325 | NA | non-coding | downstream | 37431 | 142724 ~ 211406 (-) |
| G566385 | NA | non-coding | downstream | 46752 | 201498 ~ 202085 (-) |
| G566347 | NA | non-coding | downstream | 86702 | 160043 ~ 162135 (-) |
| G566369 | NA | non-coding | downstream | 100146 | 147976 ~ 148691 (-) |
| G566317 | NA | non-coding | downstream | 102590 | 143874 ~ 146247 (-) |
| G566302 | NA | non-coding | upstream | 14851 | 280865 ~ 282107 (-) |
| LOC110517686 | LOC106592870 | non-coding | upstream | 18645 | 260449 ~ 297608 (-) |
| G566421 | NA | non-coding | upstream | 53983 | 319997 ~ 320914 (-) |
| G566295 | NA | non-coding | upstream | 76358 | 342372 ~ 370393 (-) |
| G566432 | NA | non-coding | upstream | 91944 | 357958 ~ 358415 (-) |
| LOC118965198 | LOC106595074 | other | upstream | 207870 | 473884 ~ 477537 (-) |
| LOC110519328 | LOC106574843 | other | upstream | 269005 | 527767 ~ 541749 (-) |
| LOC110487686 | bora | other | upstream | 434469 | 700093 ~ 708877 (-) |
| LOC110528715 | LOC106594730 | other | upstream | 565520 | 831066 ~ 842688 (-) |
| G567147 | NA | other | upstream | 937861 | 1203875 ~ 1207277 (-) |
