G566421


Basic Information

Item Value
gene id G566421
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 319997 ~ 320914 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU644706
GTACATTTCAGCAAGGTCATTTCATAAATAATCCATTTATTTGACATTTTCTAAATTAGTGATGCGAGCTGCTAAAATGGCGGCGCCAACAACTGCGTCACCAGACTTCAGTACAGGCTGTGCGGATGcgtcagagacagagagtagacgAACGCTCGGAAATCCCGCTCACTGCTCCGGTGTTCCACGTTCTTTCCAAATGCTCGGCTAAAAACTGCATTTAGGTTACAGGAAAGACAATTGccgctccattcattaaaatcacaatgtaaccaacacccatctatttttgtgactacACGGACTTACCAttttggttttgaagtattgaaaccaagccatttgatttgatttgaattaaaaGTTTTTaataaacatgaaaaggtgaatgtaagaagcctcatttcaaataggctacCTGTcctattaaacagcatataacaCTATAAATAGGCTAcctgtcatattaaacagcatataacaCTATAAATAGGCTAcctgtcatattaaacagcatataccACTATAAATAGGCTACCTGTCCTATTAAACAGCATATACCACTATAAATAGGCTACCTGTcctattaaacagcatataacactataactaggctacctgtcctattaaacagcatataacaCTATAAATAGGCTACCTGTCCTATTAAACAGCATATACCACTATAAATAGGCTAcctgtcatattaaacagcatataccACTATAAATAGGCCAGGTgccagacagggagcctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU644706 True 758 lncRNA 0.38 2 319997 320914

Neighbor

gene id symbol gene type direction distance location
LOC110517686 LOC106592870 coding downstream 22389 260449 ~ 297608 (-)
LOC110519534 LOC106575793 coding downstream 40579 242557 ~ 279418 (-)
LOC110510711 LOC106575981 coding downstream 111406 188244 ~ 208591 (-)
LOC110511225 LOC106574981 coding downstream 152672 150789 ~ 167325 (-)
LOC118965194 LOC106574951 coding downstream 190737 115364 ~ 129260 (-)
LOC110527261 LOC106595203 coding upstream 5489 326403 ~ 332021 (-)
LOC118965193 LOC106593324 coding upstream 21307 342221 ~ 385831 (-)
LOC118965330 LOC106575882 coding upstream 48739 369653 ~ 372114 (-)
LOC110515905 LOC106592870 coding upstream 72177 393091 ~ 403332 (-)
LOC110495372 LOC107687747 coding upstream 88379 408765 ~ 429223 (-)
G566302 NA non-coding downstream 37890 280865 ~ 282107 (-)
G566400 NA non-coding downstream 53983 248837 ~ 266014 (-)
G566403 NA non-coding downstream 57401 261921 ~ 262596 (-)
G566385 NA non-coding downstream 117912 201498 ~ 202085 (-)
G566295 NA non-coding upstream 21458 342372 ~ 370393 (-)
G566432 NA non-coding upstream 37044 357958 ~ 358415 (-)
G566452 NA non-coding upstream 86149 407063 ~ 407372 (-)
LOC118965198 LOC106595074 other upstream 152970 473884 ~ 477537 (-)
LOC110519328 LOC106574843 other upstream 214105 527767 ~ 541749 (-)
LOC110487686 bora other upstream 379569 700093 ~ 708877 (-)
LOC110528715 LOC106594730 other upstream 510620 831066 ~ 842688 (-)
G567147 NA other upstream 882961 1203875 ~ 1207277 (-)

Expression


Co-expression Network