Gene
RNA
| Item | Value |
|---|---|
| gene id | G566638 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 691463 ~ 691854 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU644982 | True | 268 | lncRNA | 0.50 | 2 | 691463 | 691854 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527172 | LOC106575921 | coding | downstream | 10036 | 677077 ~ 681427 (-) |
| LOC118965201 | LOC106583510 | coding | downstream | 18272 | 669059 ~ 673191 (-) |
| LOC110527163 | LOC106575909 | coding | downstream | 40872 | 629957 ~ 650591 (-) |
| LOC110527165 | lamp1 | coding | downstream | 66027 | 610738 ~ 625436 (-) |
| LOC110518949 | tmco3 | coding | downstream | 125233 | 541923 ~ 566230 (-) |
| LOC110487686 | bora | coding | upstream | 8239 | 700093 ~ 708877 (-) |
| LOC118936671 | LOC106574830 | coding | upstream | 33313 | 725007 ~ 818367 (-) |
| LOC110528715 | LOC106594730 | coding | upstream | 139212 | 831066 ~ 842688 (-) |
| LOC110495363 | LOC106574929 | coding | upstream | 199938 | 891792 ~ 896858 (-) |
| LOC110517159 | LOC106596293 | coding | upstream | 271600 | 963454 ~ 976670 (-) |
| G566629 | NA | non-coding | downstream | 12428 | 678604 ~ 679035 (-) |
| G566625 | NA | non-coding | downstream | 34551 | 656701 ~ 656912 (-) |
| G566619 | NA | non-coding | downstream | 62232 | 628594 ~ 629231 (-) |
| G566613 | NA | non-coding | downstream | 91321 | 598693 ~ 600142 (-) |
| G566594 | NA | non-coding | downstream | 113010 | 575096 ~ 578453 (-) |
| G566636 | dis3 | non-coding | upstream | 2351 | 694205 ~ 696978 (-) |
| G566632 | NA | non-coding | upstream | 7240 | 699094 ~ 699378 (-) |
| G566639 | NA | non-coding | upstream | 13151 | 705005 ~ 705411 (-) |
| G566711 | NA | non-coding | upstream | 17105 | 708959 ~ 709698 (-) |
| G566713 | NA | non-coding | upstream | 20114 | 711968 ~ 712168 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 149757 | 527767 ~ 541749 (-) |
| LOC118965198 | LOC106595074 | other | downstream | 216985 | 473884 ~ 477537 (-) |
| LOC110519534 | LOC106575793 | other | downstream | 440270 | 242557 ~ 279418 (-) |
| G567147 | NA | other | upstream | 512021 | 1203875 ~ 1207277 (-) |
| LOC118965204 | LOC106592365 | other | upstream | 555803 | 1247650 ~ 1284997 (-) |
| G567242 | NA | other | upstream | 787498 | 1479352 ~ 1480049 (-) |
