Gene
RNA
| Item | Value |
|---|---|
| gene id | G566731 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 747928 ~ 749264 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645116 | False | 815 | lncRNA | 0.38 | 3 | 747928 | 749264 |
| TU645117 | True | 224 | lncRNA | 0.39 | 2 | 748989 | 749264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487686 | bora | coding | downstream | 39051 | 700093 ~ 708877 (-) |
| LOC110527172 | LOC106575921 | coding | downstream | 66501 | 677077 ~ 681427 (-) |
| LOC118965201 | LOC106583510 | coding | downstream | 74737 | 669059 ~ 673191 (-) |
| LOC110527163 | LOC106575909 | coding | downstream | 97337 | 629957 ~ 650591 (-) |
| LOC110527165 | lamp1 | coding | downstream | 122492 | 610738 ~ 625436 (-) |
| LOC110528715 | LOC106594730 | coding | upstream | 81802 | 831066 ~ 842688 (-) |
| LOC110495363 | LOC106574929 | coding | upstream | 142528 | 891792 ~ 896858 (-) |
| LOC110517159 | LOC106596293 | coding | upstream | 214190 | 963454 ~ 976670 (-) |
| LOC118936672 | LOC106596203 | coding | upstream | 372562 | 1121826 ~ 1148001 (-) |
| LOC110495354 | LOC106593697 | coding | upstream | 474149 | 1223413 ~ 1247319 (-) |
| G566725 | NA | non-coding | downstream | 6066 | 740040 ~ 741862 (-) |
| LOC118936671 | LOC106574830 | non-coding | downstream | 15181 | 725007 ~ 818367 (-) |
| G566722 | NA | non-coding | downstream | 17157 | 728161 ~ 730771 (-) |
| G566718 | NA | non-coding | downstream | 26428 | 721069 ~ 721500 (-) |
| G566715 | NA | non-coding | downstream | 31083 | 716578 ~ 716845 (-) |
| G566740 | NA | non-coding | upstream | 41073 | 790337 ~ 792792 (-) |
| G566742 | NA | non-coding | upstream | 62231 | 811495 ~ 874295 (-) |
| G566750 | NA | non-coding | upstream | 104145 | 853409 ~ 856963 (-) |
| G566759 | NA | non-coding | upstream | 129062 | 878326 ~ 878718 (-) |
| G566781 | NA | non-coding | upstream | 198424 | 947688 ~ 947889 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 206222 | 527767 ~ 541749 (-) |
| LOC118965198 | LOC106595074 | other | downstream | 273450 | 473884 ~ 477537 (-) |
| LOC110519534 | LOC106575793 | other | downstream | 496735 | 242557 ~ 279418 (-) |
| G567147 | NA | other | upstream | 454611 | 1203875 ~ 1207277 (-) |
| LOC118965204 | LOC106592365 | other | upstream | 498393 | 1247650 ~ 1284997 (-) |
| G567242 | NA | other | upstream | 730088 | 1479352 ~ 1480049 (-) |
| G567318 | LOC106592056 | other | upstream | 822095 | 1571359 ~ 1571804 (-) |
