Gene
RNA
| Item | Value |
|---|---|
| gene id | G567046 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 994043 ~ 994323 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645535 | True | 281 | lncRNA | 0.57 | 1 | 994043 | 994323 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517159 | LOC106596293 | coding | downstream | 17373 | 963454 ~ 976670 (-) |
| LOC110495363 | LOC106574929 | coding | downstream | 97185 | 891792 ~ 896858 (-) |
| LOC110528715 | LOC106594730 | coding | downstream | 151355 | 831066 ~ 842688 (-) |
| LOC118936671 | LOC106574830 | coding | downstream | 175676 | 725007 ~ 818367 (-) |
| LOC110487686 | bora | coding | downstream | 285166 | 700093 ~ 708877 (-) |
| LOC118936672 | LOC106596203 | coding | upstream | 127503 | 1121826 ~ 1148001 (-) |
| LOC110495354 | LOC106593697 | coding | upstream | 229090 | 1223413 ~ 1247319 (-) |
| LOC118965204 | LOC106592365 | coding | upstream | 253327 | 1247650 ~ 1284997 (-) |
| LOC110496997 | LOC106595477 | coding | upstream | 290932 | 1285255 ~ 1312938 (-) |
| LOC110496970 | LOC106574861 | coding | upstream | 320318 | 1314641 ~ 1322859 (-) |
| G567041 | LOC107654276 | non-coding | downstream | 7828 | 985007 ~ 986215 (-) |
| G567042 | NA | non-coding | downstream | 8567 | 985073 ~ 985476 (-) |
| G566803 | NA | non-coding | downstream | 13224 | 980613 ~ 980819 (-) |
| G566789 | NA | non-coding | downstream | 31548 | 961346 ~ 962495 (-) |
| G567047 | NA | non-coding | upstream | 411 | 994734 ~ 995059 (-) |
| G567049 | NA | non-coding | upstream | 7797 | 1002120 ~ 1005712 (-) |
| G567050 | NA | non-coding | upstream | 10042 | 1004365 ~ 1004787 (-) |
| G567055 | NA | non-coding | upstream | 20837 | 1015160 ~ 1015519 (-) |
| G567053 | NA | non-coding | upstream | 23099 | 1017422 ~ 1017765 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 452337 | 527767 ~ 541749 (-) |
| LOC118965198 | LOC106595074 | other | downstream | 519565 | 473884 ~ 477537 (-) |
| LOC110519534 | LOC106575793 | other | downstream | 742850 | 242557 ~ 279418 (-) |
| G567147 | NA | other | upstream | 209552 | 1203875 ~ 1207277 (-) |
| G567242 | NA | other | upstream | 485029 | 1479352 ~ 1480049 (-) |
| G567318 | LOC106592056 | other | upstream | 577036 | 1571359 ~ 1571804 (-) |
| LOC110527180 | LOC106575808 | other | upstream | 618545 | 1611276 ~ 1636199 (-) |
