Gene
RNA
| Item | Value |
|---|---|
| gene id | G567050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 1004365 ~ 1004787 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vacuolar protein sorting-associated protein 8 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645539 | True | 331 | lncRNA | 0.49 | 2 | 1004365 | 1004787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517159 | LOC106596293 | coding | downstream | 27695 | 963454 ~ 976670 (-) |
| LOC110495363 | LOC106574929 | coding | downstream | 107507 | 891792 ~ 896858 (-) |
| LOC110528715 | LOC106594730 | coding | downstream | 161677 | 831066 ~ 842688 (-) |
| LOC118936671 | LOC106574830 | coding | downstream | 185998 | 725007 ~ 818367 (-) |
| LOC110487686 | bora | coding | downstream | 295488 | 700093 ~ 708877 (-) |
| LOC118936672 | LOC106596203 | coding | upstream | 117039 | 1121826 ~ 1148001 (-) |
| LOC110495354 | LOC106593697 | coding | upstream | 218626 | 1223413 ~ 1247319 (-) |
| LOC118965204 | LOC106592365 | coding | upstream | 242863 | 1247650 ~ 1284997 (-) |
| LOC110496997 | LOC106595477 | coding | upstream | 280468 | 1285255 ~ 1312938 (-) |
| LOC110496970 | LOC106574861 | coding | upstream | 309854 | 1314641 ~ 1322859 (-) |
| G567047 | NA | non-coding | downstream | 9306 | 994734 ~ 995059 (-) |
| G567046 | NA | non-coding | downstream | 10042 | 994043 ~ 994323 (-) |
| G567041 | LOC107654276 | non-coding | downstream | 18150 | 985007 ~ 986215 (-) |
| G567042 | NA | non-coding | downstream | 18889 | 985073 ~ 985476 (-) |
| G566803 | NA | non-coding | downstream | 23546 | 980613 ~ 980819 (-) |
| G567055 | NA | non-coding | upstream | 10373 | 1015160 ~ 1015519 (-) |
| G567053 | NA | non-coding | upstream | 12635 | 1017422 ~ 1017765 (-) |
| G567064 | NA | non-coding | upstream | 27102 | 1031889 ~ 1032860 (-) |
| G567072 | NA | non-coding | upstream | 38865 | 1043652 ~ 1047482 (-) |
| G567080 | NA | non-coding | upstream | 62042 | 1066829 ~ 1067126 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 462659 | 527767 ~ 541749 (-) |
| LOC118965198 | LOC106595074 | other | downstream | 529887 | 473884 ~ 477537 (-) |
| LOC110519534 | LOC106575793 | other | downstream | 753172 | 242557 ~ 279418 (-) |
| G567147 | NA | other | upstream | 199088 | 1203875 ~ 1207277 (-) |
| G567242 | NA | other | upstream | 474565 | 1479352 ~ 1480049 (-) |
| G567318 | LOC106592056 | other | upstream | 566572 | 1571359 ~ 1571804 (-) |
| LOC110527180 | LOC106575808 | other | upstream | 608081 | 1611276 ~ 1636199 (-) |
