Gene
RNA
| Item | Value |
|---|---|
| gene id | G567190 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 1352064 ~ 1352833 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| alpha-taxilin-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645724 | True | 252 | lncRNA | 0.40 | 2 | 1352064 | 1352833 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495433 | LOC106574863 | coding | downstream | 25808 | 1322428 ~ 1326256 (-) |
| LOC110496970 | LOC106574861 | coding | downstream | 29205 | 1314641 ~ 1322859 (-) |
| LOC110496997 | LOC106595477 | coding | downstream | 39126 | 1285255 ~ 1312938 (-) |
| LOC118965204 | LOC106592365 | coding | downstream | 67067 | 1247650 ~ 1284997 (-) |
| LOC110495354 | LOC106593697 | coding | downstream | 104745 | 1223413 ~ 1247319 (-) |
| LOC110495420 | LOC106574901 | coding | upstream | 4399 | 1357232 ~ 1362903 (-) |
| LOC110495424 | ap1s2 | coding | upstream | 15351 | 1368184 ~ 1384631 (-) |
| LOC110495418 | LOC106594797 | coding | upstream | 67207 | 1420040 ~ 1434550 (-) |
| LOC110517469 | LOC106574677 | coding | upstream | 82694 | 1435527 ~ 1462610 (-) |
| LOC110496987 | LOC106600438 | coding | upstream | 129458 | 1482291 ~ 1552155 (-) |
| G567179 | NA | non-coding | downstream | 31277 | 1320332 ~ 1320787 (-) |
| G567177 | NA | non-coding | downstream | 41205 | 1310473 ~ 1310859 (-) |
| G567171 | NA | non-coding | downstream | 55277 | 1295858 ~ 1296787 (-) |
| G567159 | NA | non-coding | downstream | 98066 | 1253277 ~ 1253998 (-) |
| G567195 | NA | non-coding | upstream | 2648 | 1355481 ~ 1355703 (-) |
| G567192 | NA | non-coding | upstream | 3022 | 1355855 ~ 1356170 (-) |
| G567194 | NA | non-coding | upstream | 3718 | 1356551 ~ 1356768 (-) |
| G567196 | NA | non-coding | upstream | 7329 | 1360162 ~ 1360432 (-) |
| G567147 | NA | other | downstream | 144787 | 1203875 ~ 1207277 (-) |
| LOC110528715 | LOC106594730 | other | downstream | 517373 | 831066 ~ 842688 (-) |
| LOC110487686 | bora | other | downstream | 649133 | 700093 ~ 708877 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 810358 | 527767 ~ 541749 (-) |
| G567242 | NA | other | upstream | 126519 | 1479352 ~ 1480049 (-) |
| G567318 | LOC106592056 | other | upstream | 218526 | 1571359 ~ 1571804 (-) |
| LOC110527180 | LOC106575808 | other | upstream | 260035 | 1611276 ~ 1636199 (-) |
| LOC118936344 | LOC106574915 | other | upstream | 694948 | 2047781 ~ 2055865 (-) |
| G567609 | NA | other | upstream | 728427 | 2081260 ~ 2083338 (-) |
