Gene
RNA
| Item | Value |
|---|---|
| gene id | G567216 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 1407248 ~ 1407556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: phosphorylase b kinase regulatory subunit alpha, liver isoform-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645754 | True | 309 | lncRNA | 0.59 | 1 | 1407248 | 1407556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495424 | ap1s2 | coding | downstream | 22617 | 1368184 ~ 1384631 (-) |
| LOC110495420 | LOC106574901 | coding | downstream | 44345 | 1357232 ~ 1362903 (-) |
| LOC110495433 | LOC106574863 | coding | downstream | 80992 | 1322428 ~ 1326256 (-) |
| LOC110496970 | LOC106574861 | coding | downstream | 84389 | 1314641 ~ 1322859 (-) |
| LOC110496997 | LOC106595477 | coding | downstream | 94310 | 1285255 ~ 1312938 (-) |
| LOC110495418 | LOC106594797 | coding | upstream | 12484 | 1420040 ~ 1434550 (-) |
| LOC110517469 | LOC106574677 | coding | upstream | 27971 | 1435527 ~ 1462610 (-) |
| LOC110496987 | LOC106600438 | coding | upstream | 74735 | 1482291 ~ 1552155 (-) |
| LOC110527180 | LOC106575808 | coding | upstream | 203720 | 1611276 ~ 1636199 (-) |
| LOC118965205 | NA | coding | upstream | 230452 | 1638008 ~ 1642732 (-) |
| G567133 | NA | non-coding | downstream | 22318 | 1384676 ~ 1384930 (-) |
| G567196 | NA | non-coding | downstream | 46816 | 1360162 ~ 1360432 (-) |
| G567194 | NA | non-coding | downstream | 50480 | 1356551 ~ 1356768 (-) |
| G567192 | NA | non-coding | downstream | 51078 | 1355855 ~ 1356170 (-) |
| G567220 | LOC106574897 | non-coding | upstream | 8293 | 1415849 ~ 1416418 (-) |
| G567225 | NA | non-coding | upstream | 20932 | 1428488 ~ 1428734 (-) |
| G567229 | NA | non-coding | upstream | 34214 | 1441770 ~ 1443049 (-) |
| G567228 | NA | non-coding | upstream | 41646 | 1449202 ~ 1452029 (-) |
| LOC118965204 | LOC106592365 | other | downstream | 156965 | 1247650 ~ 1284997 (-) |
| G567147 | NA | other | downstream | 199971 | 1203875 ~ 1207277 (-) |
| LOC110528715 | LOC106594730 | other | downstream | 572557 | 831066 ~ 842688 (-) |
| LOC110487686 | bora | other | downstream | 704317 | 700093 ~ 708877 (-) |
| LOC110519328 | LOC106574843 | other | downstream | 865542 | 527767 ~ 541749 (-) |
| G567242 | NA | other | upstream | 71796 | 1479352 ~ 1480049 (-) |
| G567318 | LOC106592056 | other | upstream | 163803 | 1571359 ~ 1571804 (-) |
| LOC118936344 | LOC106574915 | other | upstream | 640225 | 2047781 ~ 2055865 (-) |
| G567609 | NA | other | upstream | 673704 | 2081260 ~ 2083338 (-) |
