G567228


Basic Information

Item Value
gene id G567228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 1449202 ~ 1452029 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU645782
ggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactgtctaggacacaacactgactgtctaggacacaacactgactatctaggacacaacACTGACTGTCTAggacacaataacacaacatggACTGTCTAggacacaataacacaacactgactatctagtacacaacactgactatctaggacacaacactgactatctaggacactaacacaacactgactatctagtacacaataacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctagtacacaataacacaacactgactatctaggacacaacactgactatctagtacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggactcaataacacaacactgactatctagtacacaacactgactatctaggacacaacactgactatctaggacacaacacaacactgactatctagtacacaataacacaacactgactatctagtacacaacactgactatctaggacaTAACAGCCCCTCAGCTCCCAAAATAGAGCTCTTTCTCCCGGTTGTTTATATACATAATGAAAAGACTTTGTTTCACCTCAATGGCCTCCTTCCCTGTAGTCAGAGACGCATCTCATCAAACTCAAGAATCCTTGAGACGAAtgttaaacacaca
>TU645783
acaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctagtaCACAACATtgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacAATGACTATCTAGGACACAATAACACgacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctagtaCACAACATTGACTATCTAGGACtcaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactgtctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctagtacacaataacacaatactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggatACAATAACACAATACTGACTGTCtaggacacaacactgactatctagtacacaataacacaacactgactatctaggatACAATAACACAATACTGACTGTCtaggacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctggtacacaataacacaacactgaCTGTCTAGGACACAATACTGACTATCTAggacacaaTACTGACTATCTagtacacaataacacaatactGACTATCTAgtacacaacactgactatctaggatacaataacacaacactgactatctaggacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggacacaacactgactatctaggacacaacactgactatctaggacacaataacacaacactgactatctagtacacaataacacaacactgactatctaggacacaacactgactatctagtacacaataacacaacactgactatctaggacacaataacacaacactgactatctaggactcaataacacaacactgactatctagtacacaacactgactatctaggacacaacactgactatctaggacacaacacaacactgactatctagtacacaataacacaacactgactatctagtacacaacactgactatctaggacaTAACAGCCCCTCAGCTCCCAAAATAGAGCTCTTTCTCCCGGTTGTTTATATACATAATGAAAAGACTTTGTTTCACCTCAATGGCCTCCTTCCCTGTAGTCAGAGACGCATCTCATCAAACTCAAGAATCCTTGAGACGAAtgttaaacacaca

Function

NR:

description
PREDICTED: extracellular matrix protein FRAS1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU645782 False 1004 lncRNA 0.40 2 1449202 1452029
TU645783 True 1812 lncRNA 0.40 3 1449202 1451426
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495418 LOC106594797 coding downstream 14652 1420040 ~ 1434550 (-)
LOC110495424 ap1s2 coding downstream 64571 1368184 ~ 1384631 (-)
LOC110495420 LOC106574901 coding downstream 86299 1357232 ~ 1362903 (-)
LOC110495433 LOC106574863 coding downstream 122946 1322428 ~ 1326256 (-)
LOC110496970 LOC106574861 coding downstream 126343 1314641 ~ 1322859 (-)
LOC110496987 LOC106600438 coding upstream 30262 1482291 ~ 1552155 (-)
LOC110527180 LOC106575808 coding upstream 159247 1611276 ~ 1636199 (-)
LOC118965205 NA coding upstream 185979 1638008 ~ 1642732 (-)
LOC110527182 LOC106575851 coding upstream 190762 1642791 ~ 1666740 (-)
LOC118965206 LOC106593605 coding upstream 359654 1811683 ~ 1814154 (-)
G567229 NA non-coding downstream 6153 1441770 ~ 1443049 (-)
LOC110517469 LOC106574677 non-coding downstream 12661 1435527 ~ 1462610 (-)
G567225 NA non-coding downstream 20468 1428488 ~ 1428734 (-)
G567220 LOC106574897 non-coding downstream 32784 1415849 ~ 1416418 (-)
G567216 NA non-coding downstream 41646 1407248 ~ 1407556 (-)
G567239 NA non-coding upstream 14592 1466621 ~ 1468096 (-)
G567237 NA non-coding upstream 22475 1474504 ~ 1474804 (-)
G567241 NA non-coding upstream 24158 1476187 ~ 1476456 (-)
G567244 NA non-coding upstream 28813 1480842 ~ 1481309 (-)
G567245 NA non-coding upstream 29395 1481424 ~ 1481642 (-)
LOC118965204 LOC106592365 other downstream 198919 1247650 ~ 1284997 (-)
G567147 NA other downstream 241925 1203875 ~ 1207277 (-)
LOC110528715 LOC106594730 other downstream 614511 831066 ~ 842688 (-)
LOC110487686 bora other downstream 746271 700093 ~ 708877 (-)
LOC110519328 LOC106574843 other downstream 907496 527767 ~ 541749 (-)
G567242 NA other upstream 27323 1479352 ~ 1480049 (-)
G567318 LOC106592056 other upstream 119330 1571359 ~ 1571804 (-)
LOC118936344 LOC106574915 other upstream 595752 2047781 ~ 2055865 (-)
G567609 NA other upstream 629231 2081260 ~ 2083338 (-)

Expression

G567228 Expression in all Baseline Samples

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G567228 Expression in each Bioproject

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G567228 Expression in each Sample
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Co-expression Network