G567239


Basic Information

Item Value
gene id G567239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 1466621 ~ 1468096 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU645795
cacttgctttggcaatgttaacatatgtttcccatgtcaataaagcccctcgAATTGAATtgacttgaattgagagagacatagagagaaagagagagagaacgacagatagacagagatatagatagatagagagagagagagagagagagagagaagaaacagagagagagatagccagagacagccagagacagagagagacagaatgagagatagagagacagaatgagagacagagacacacatagacagagacacacatagacagagacagagagagatagagacacacatagacagagacacacatagacagagacacacatagacagagacagagagagatagagacagagagagatagagacacacatagacagaaacacacatagacagagacacacatagacagagacagagagagatagagacagatagagatagagacacacatagacagagacacacatagacagagacacacatagacagagacacacatagacagagacagagagagatagagacacacatagacagagacacacatagacagagacagagagagacagagacagagagacagacaaagacagagacagacagagacagagacagagagagacagacagagagacagagacagacagagagacagagacagacagagagagagagagagagagacagagacagagagacacacagagagagagagagacagagacagagacagacaaagagagagagagacagacagagacagacagacagagagagagacagacagagacagacagagacagacagagagacagagagagagagagagagagagacagagacagagagacacagagagagagagacagagacagagagacagagagacacagagagagagagacacagacagagagagagacagagagacagagacagagagacacacagagagagagatagacagagagagacagacagagagagacagagagacagagagagacagacagagagagacagagagagaaagacagagacagacagagacagagacagacagaaggctTGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU645795 True 1080 lncRNA 0.46 2 1466621 1468096

Neighbor

gene id symbol gene type direction distance location
LOC110517469 LOC106574677 coding downstream 4011 1435527 ~ 1462610 (-)
LOC110495418 LOC106594797 coding downstream 32071 1420040 ~ 1434550 (-)
LOC110495424 ap1s2 coding downstream 81990 1368184 ~ 1384631 (-)
LOC110495420 LOC106574901 coding downstream 103718 1357232 ~ 1362903 (-)
LOC110495433 LOC106574863 coding downstream 140365 1322428 ~ 1326256 (-)
LOC110496987 LOC106600438 coding upstream 14195 1482291 ~ 1552155 (-)
LOC110527180 LOC106575808 coding upstream 143180 1611276 ~ 1636199 (-)
LOC118965205 NA coding upstream 169912 1638008 ~ 1642732 (-)
LOC110527182 LOC106575851 coding upstream 174695 1642791 ~ 1666740 (-)
LOC118965206 LOC106593605 coding upstream 343587 1811683 ~ 1814154 (-)
G567228 NA non-coding downstream 14592 1449202 ~ 1452029 (-)
G567229 NA non-coding downstream 23572 1441770 ~ 1443049 (-)
G567225 NA non-coding downstream 37887 1428488 ~ 1428734 (-)
G567220 LOC106574897 non-coding downstream 50203 1415849 ~ 1416418 (-)
G567237 NA non-coding upstream 6408 1474504 ~ 1474804 (-)
G567241 NA non-coding upstream 8091 1476187 ~ 1476456 (-)
G567244 NA non-coding upstream 12746 1480842 ~ 1481309 (-)
G567245 NA non-coding upstream 13328 1481424 ~ 1481642 (-)
G567258 NA non-coding upstream 54057 1522153 ~ 1523251 (-)
LOC118965204 LOC106592365 other downstream 216338 1247650 ~ 1284997 (-)
G567147 NA other downstream 259344 1203875 ~ 1207277 (-)
LOC110528715 LOC106594730 other downstream 631930 831066 ~ 842688 (-)
LOC110487686 bora other downstream 763690 700093 ~ 708877 (-)
LOC110519328 LOC106574843 other downstream 924915 527767 ~ 541749 (-)
G567242 NA other upstream 11256 1479352 ~ 1480049 (-)
G567318 LOC106592056 other upstream 103263 1571359 ~ 1571804 (-)
LOC118936344 LOC106574915 other upstream 579685 2047781 ~ 2055865 (-)
G567609 NA other upstream 613164 2081260 ~ 2083338 (-)

Expression


Co-expression Network