Gene
RNA
| Item | Value |
|---|---|
| gene id | G567258 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 1522153 ~ 1523251 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645814 | True | 223 | lncRNA | 0.33 | 2 | 1522153 | 1523251 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517469 | LOC106574677 | coding | downstream | 59543 | 1435527 ~ 1462610 (-) |
| LOC110495418 | LOC106594797 | coding | downstream | 87603 | 1420040 ~ 1434550 (-) |
| LOC110495424 | ap1s2 | coding | downstream | 137522 | 1368184 ~ 1384631 (-) |
| LOC110495420 | LOC106574901 | coding | downstream | 159250 | 1357232 ~ 1362903 (-) |
| LOC110495433 | LOC106574863 | coding | downstream | 195897 | 1322428 ~ 1326256 (-) |
| LOC110527180 | LOC106575808 | coding | upstream | 88025 | 1611276 ~ 1636199 (-) |
| LOC118965205 | NA | coding | upstream | 114757 | 1638008 ~ 1642732 (-) |
| LOC110527182 | LOC106575851 | coding | upstream | 119540 | 1642791 ~ 1666740 (-) |
| LOC118965206 | LOC106593605 | coding | upstream | 288432 | 1811683 ~ 1814154 (-) |
| obi1 | LOC106575007 | coding | upstream | 295448 | 1818699 ~ 1827488 (-) |
| G567245 | NA | non-coding | downstream | 40511 | 1481424 ~ 1481642 (-) |
| G567244 | NA | non-coding | downstream | 40844 | 1480842 ~ 1481309 (-) |
| G567241 | NA | non-coding | downstream | 45697 | 1476187 ~ 1476456 (-) |
| G567237 | NA | non-coding | downstream | 47349 | 1474504 ~ 1474804 (-) |
| G567239 | NA | non-coding | downstream | 54057 | 1466621 ~ 1468096 (-) |
| G567263 | NA | non-coding | upstream | 3886 | 1527137 ~ 1527773 (-) |
| G567266 | NA | non-coding | upstream | 13147 | 1536398 ~ 1537571 (-) |
| G567319 | NA | non-coding | upstream | 50884 | 1574135 ~ 1574484 (-) |
| G567320 | LOC106613431 | non-coding | upstream | 51380 | 1574631 ~ 1574966 (-) |
| G567322 | NA | non-coding | upstream | 57081 | 1580332 ~ 1580543 (-) |
| G567242 | NA | other | downstream | 42104 | 1479352 ~ 1480049 (-) |
| LOC118965204 | LOC106592365 | other | downstream | 271870 | 1247650 ~ 1284997 (-) |
| G567147 | NA | other | downstream | 314876 | 1203875 ~ 1207277 (-) |
| LOC110528715 | LOC106594730 | other | downstream | 687462 | 831066 ~ 842688 (-) |
| LOC110487686 | bora | other | downstream | 819222 | 700093 ~ 708877 (-) |
| G567318 | LOC106592056 | other | upstream | 48108 | 1571359 ~ 1571804 (-) |
| LOC118936344 | LOC106574915 | other | upstream | 524530 | 2047781 ~ 2055865 (-) |
| G567609 | NA | other | upstream | 558009 | 2081260 ~ 2083338 (-) |
| G567651 | NA | other | upstream | 646167 | 2169418 ~ 2170232 (-) |
