Gene
RNA
| Item | Value |
|---|---|
| gene id | G567318 |
| gene name | LOC106592056 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 1571359 ~ 1571804 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sex comb on midleg-like protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU645888 | True | 446 | TUCP | 0.52 | 1 | 1571359 | 1571804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496987 | LOC106600438 | coding | downstream | 19204 | 1482291 ~ 1552155 (-) |
| LOC110517469 | LOC106574677 | coding | downstream | 108749 | 1435527 ~ 1462610 (-) |
| LOC110495418 | LOC106594797 | coding | downstream | 136809 | 1420040 ~ 1434550 (-) |
| LOC110495424 | ap1s2 | coding | downstream | 186728 | 1368184 ~ 1384631 (-) |
| LOC110495420 | LOC106574901 | coding | downstream | 208456 | 1357232 ~ 1362903 (-) |
| LOC110527180 | LOC106575808 | coding | upstream | 39472 | 1611276 ~ 1636199 (-) |
| LOC118965205 | NA | coding | upstream | 66204 | 1638008 ~ 1642732 (-) |
| LOC110527182 | LOC106575851 | coding | upstream | 70987 | 1642791 ~ 1666740 (-) |
| LOC118965206 | LOC106593605 | coding | upstream | 239879 | 1811683 ~ 1814154 (-) |
| obi1 | LOC106575007 | coding | upstream | 246895 | 1818699 ~ 1827488 (-) |
| G567266 | NA | non-coding | downstream | 33788 | 1536398 ~ 1537571 (-) |
| G567263 | NA | non-coding | downstream | 43586 | 1527137 ~ 1527773 (-) |
| G567258 | NA | non-coding | downstream | 48108 | 1522153 ~ 1523251 (-) |
| G567245 | NA | non-coding | downstream | 89717 | 1481424 ~ 1481642 (-) |
| G567244 | NA | non-coding | downstream | 90050 | 1480842 ~ 1481309 (-) |
| G567319 | NA | non-coding | upstream | 2331 | 1574135 ~ 1574484 (-) |
| G567320 | LOC106613431 | non-coding | upstream | 2827 | 1574631 ~ 1574966 (-) |
| G567322 | NA | non-coding | upstream | 8528 | 1580332 ~ 1580543 (-) |
| G567343 | NA | non-coding | upstream | 58049 | 1629853 ~ 1630738 (-) |
| G567242 | NA | other | downstream | 91310 | 1479352 ~ 1480049 (-) |
| LOC118965204 | LOC106592365 | other | downstream | 321076 | 1247650 ~ 1284997 (-) |
| G567147 | NA | other | downstream | 364082 | 1203875 ~ 1207277 (-) |
| LOC110528715 | LOC106594730 | other | downstream | 736668 | 831066 ~ 842688 (-) |
| LOC110487686 | bora | other | downstream | 868428 | 700093 ~ 708877 (-) |
| LOC118936344 | LOC106574915 | other | upstream | 475977 | 2047781 ~ 2055865 (-) |
| G567609 | NA | other | upstream | 509456 | 2081260 ~ 2083338 (-) |
| G567651 | NA | other | upstream | 597614 | 2169418 ~ 2170232 (-) |
| G567653 | NA | other | upstream | 602418 | 2174222 ~ 2176139 (-) |
