G567671


Basic Information

Item Value
gene id G567671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 2263813 ~ 2264538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU646470
acagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgacaataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagactttcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatGTAGTGCACTAAGGATGCATTGAAAGATGTCTTTATCACAGACAGTACACCCTATAATACTGATATTATTAGcagggaaaaaaataaaacagggACTAAACAATAAGGTGGACAGGTTTCAGTCTCCAGGGAGGATGTTTTAGTCAGATTAAAACAGGAACTAGGAATAAGGTGGACAGGTTGAGGATGTTTTAGTCAGATTAAAAACAGGATGAGACCAATGAAATTACTGCAATGCaaagttatacacaca
>TU646471
acagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgacaataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagagtacagtatgtagtgactataacagactgtagactttcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatgtagtgcactactttatcatGTAGTGCACTAAGGATGCATTGAAAGATGTCTTTATCACAGACAGTACACCCTATAATACTGATATTATTAGcagggaaaaaaataaaacagggACTAAACAATAAGGTGGACAGGTTTCAGCCTCCAGGGAGGATGTTTTAGTCAGATTAAAACAGGAAGTAGGAATAAGGTGGACAGGTTGAGGATGTTTTAGTCAGATTAAAAACAGGATGAGACCAATGAAATTACTGCAATGCaaagttatacacaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593816 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU646470 False 662 lncRNA 0.36 2 2263813 2264538
TU646471 True 662 lncRNA 0.36 2 2263813 2264538

Neighbor

gene id symbol gene type direction distance location
LOC118965208 NA coding downstream 64186 2197587 ~ 2199634 (-)
LOC118936344 LOC106574915 coding downstream 207948 2047781 ~ 2055865 (-)
LOC118936673 LOC106575000 coding downstream 223683 2024724 ~ 2040130 (-)
LOC110516345 LOC106575008 coding downstream 258313 1973992 ~ 2005500 (-)
obi1 LOC106575007 coding downstream 436325 1818699 ~ 1827488 (-)
LOC110528716 LOC106575929 coding upstream 278634 2543172 ~ 2554006 (-)
LOC118965210 NA coding upstream 313001 2577539 ~ 2578690 (-)
LOC110512990 LOC102781982 coding upstream 748350 3012888 ~ 3179541 (-)
LOC118965211 LOC106575349 coding upstream 1534957 3799338 ~ 3814806 (-)
LOC118965332 LOC106594540 coding upstream 1535849 3800387 ~ 3801059 (-)
G567673 NA non-coding downstream 121 2262298 ~ 2263692 (-)
G567693 NA non-coding downstream 10797 2251521 ~ 2253016 (-)
G567691 NA non-coding downstream 14763 2247309 ~ 2249050 (-)
G567678 NA non-coding downstream 43131 2219819 ~ 2220682 (-)
G567676 NA non-coding downstream 44399 2218920 ~ 2219414 (-)
G567672 NA non-coding upstream 811 2265349 ~ 2266261 (-)
G567703 NA non-coding upstream 35287 2299825 ~ 2300140 (-)
G567714 NA non-coding upstream 51142 2315680 ~ 2315993 (-)
G567730 NA non-coding upstream 82777 2347315 ~ 2347625 (-)
G567733 NA non-coding upstream 85954 2350492 ~ 2351287 (-)
G567685 arl13b other downstream 27521 2233134 ~ 2236292 (-)
G567677 NA other downstream 40598 2221088 ~ 2223215 (-)
G567653 NA other downstream 87674 2174222 ~ 2176139 (-)
G567651 NA other downstream 93581 2169418 ~ 2170232 (-)
G567609 NA other downstream 180475 2081260 ~ 2083338 (-)
G568309 NA other upstream 739797 3004335 ~ 3005630 (-)
G568464 NA other upstream 1102558 3367096 ~ 3367864 (-)
LOC110512788 LOC106595034 other upstream 2551465 4770818 ~ 4854775 (-)
G569646 NA other upstream 2560093 4824631 ~ 4825104 (-)
LOC110516650 gtf3c3 other upstream 2596526 4858173 ~ 4878929 (-)

Expression


Co-expression Network