Gene
RNA
| Item | Value |
|---|---|
| gene id | G569030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 4368439 ~ 4368750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110534020 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU648277 | True | 312 | lncRNA | 0.50 | 1 | 4368439 | 4368750 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527087 | LOC106575913 | coding | upstream | 18389 | 4332159 ~ 4350062 (+) |
| LOC118965333 | cfap47 | coding | upstream | 49953 | 4278763 ~ 4318486 (+) |
| LOC118965372 | NA | coding | upstream | 174309 | 4193520 ~ 4194130 (+) |
| LOC110517249 | LOC106575925 | coding | upstream | 1791860 | 2575267 ~ 2576579 (+) |
| LOC110511689 | LOC105007615 | coding | upstream | 1849124 | 2499705 ~ 2519315 (+) |
| LOC110511356 | pcnp | coding | downstream | 510381 | 4879131 ~ 4882252 (+) |
| LOC110518830 | LOC106591572 | coding | downstream | 554428 | 4923178 ~ 4950963 (+) |
| LOC118965217 | LOC106598227 | coding | downstream | 639340 | 4902577 ~ 5020268 (+) |
| LOC110496914 | LOC106574890 | coding | downstream | 788002 | 5156752 ~ 5160240 (+) |
| il-1ra | il-1ra | coding | downstream | 914823 | 5283573 ~ 5310119 (+) |
| G569014 | NA | non-coding | upstream | 27470 | 4340306 ~ 4340969 (+) |
| G569013 | NA | non-coding | upstream | 28618 | 4338952 ~ 4339821 (+) |
| G569003 | NA | non-coding | upstream | 38896 | 4327433 ~ 4329543 (+) |
| G569000 | NA | non-coding | upstream | 49669 | 4318571 ~ 4318770 (+) |
| LOC110519331 | LOC106574979 | non-coding | downstream | 14780 | 4355370 ~ 4725277 (+) |
| G569034 | NA | non-coding | downstream | 29496 | 4398246 ~ 4398785 (+) |
| G569035 | NA | non-coding | downstream | 32082 | 4400832 ~ 4402053 (+) |
| G569050 | NA | non-coding | downstream | 64723 | 4433473 ~ 4892018 (+) |
| G569055 | NA | non-coding | downstream | 76142 | 4444892 ~ 4447443 (+) |
| G568631 | NA | other | upstream | 723481 | 3644249 ~ 3644958 (+) |
| G568263 | NA | other | upstream | 968544 | 3398832 ~ 3406995 (+) |
| G568255 | NA | other | upstream | 988924 | 3379099 ~ 3379515 (+) |
| G567782 | NA | other | upstream | 1894216 | 2473650 ~ 2474223 (+) |
| G569207 | NA | other | downstream | 499367 | 4868117 ~ 4868514 (+) |
| G569218 | LOC106591403 | other | downstream | 525318 | 4894068 ~ 4896072 (+) |
| LOC110497014 | LOC106575751 | other | downstream | 1403211 | 5771961 ~ 5775857 (+) |
| G569923 | NA | other | downstream | 1407561 | 5776311 ~ 5776819 (+) |
| G570065 | ipo5 | other | downstream | 1653382 | 6022132 ~ 6024311 (+) |
