Gene
RNA
| Item | Value |
|---|---|
| gene id | G569182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 4880549 ~ 4900337 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU648475 | True | 434 | lncRNA | 0.38 | 2 | 4880549 | 4900337 |
4,872,000
4,876,000
4,880,000
4,884,000
4,888,000
4,892,000
4,896,000
4,900,000
4,904,000
4,908,000
4,912,000
4,916,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519331 | LOC106574979 | coding | upstream | 155272 | 4355370 ~ 4725277 (+) |
| LOC110527087 | LOC106575913 | coding | upstream | 530499 | 4332159 ~ 4350062 (+) |
| LOC118965333 | cfap47 | coding | upstream | 562063 | 4278763 ~ 4318486 (+) |
| LOC118965372 | NA | coding | upstream | 686419 | 4193520 ~ 4194130 (+) |
| LOC110517249 | LOC106575925 | coding | upstream | 2303970 | 2575267 ~ 2576579 (+) |
| LOC110518830 | LOC106591572 | coding | downstream | 22841 | 4923178 ~ 4950963 (+) |
| LOC118965217 | LOC106598227 | coding | downstream | 107753 | 4902577 ~ 5020268 (+) |
| LOC110496914 | LOC106574890 | coding | downstream | 256415 | 5156752 ~ 5160240 (+) |
| il-1ra | il-1ra | coding | downstream | 383236 | 5283573 ~ 5310119 (+) |
| LOC110511234 | nhs | coding | downstream | 445751 | 5346088 ~ 5415724 (+) |
| G569206 | NA | non-coding | upstream | 12504 | 4867536 ~ 4868045 (+) |
| G569202 | NA | non-coding | upstream | 19655 | 4860520 ~ 4860894 (+) |
| G569201 | NA | non-coding | upstream | 21226 | 4858922 ~ 4859323 (+) |
| G569200 | NA | non-coding | upstream | 21708 | 4858380 ~ 4858841 (+) |
| G569190 | NA | non-coding | upstream | 46834 | 4833313 ~ 4833715 (+) |
| G569221 | NA | non-coding | downstream | 255 | 4900592 ~ 4901508 (+) |
| G569233 | NA | non-coding | downstream | 11367 | 4911704 ~ 4912754 (+) |
| G569237 | NA | non-coding | downstream | 17892 | 4918229 ~ 4918875 (+) |
| G569246 | NA | non-coding | downstream | 43395 | 4943732 ~ 4945011 (+) |
| G569207 | NA | other | upstream | 12035 | 4868117 ~ 4868514 (+) |
| G568631 | NA | other | upstream | 1235591 | 3644249 ~ 3644958 (+) |
| G568263 | NA | other | upstream | 1480654 | 3398832 ~ 3406995 (+) |
| G568255 | NA | other | upstream | 1501034 | 3379099 ~ 3379515 (+) |
| LOC110497014 | LOC106575751 | other | downstream | 871624 | 5771961 ~ 5775857 (+) |
| G569923 | NA | other | downstream | 875974 | 5776311 ~ 5776819 (+) |
| G570065 | ipo5 | other | downstream | 1121795 | 6022132 ~ 6024311 (+) |
| LOC110518527 | nud15 | other | downstream | 1137550 | 6037832 ~ 6038818 (+) |
| G570105 | NA | other | downstream | 1244748 | 6145085 ~ 6147543 (+) |
