G569846


Basic Information

Item Value
gene id G569846
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 5417307 ~ 5418483 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU649355
atctctatcctccctctctgtatctctatcatctctctctgtttatatgtcctccctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctatttcatctctctctgtatctctatcctctctgtatctctatcatctctctctgtatctctatcctctctgtatctctataatttCTGTCTGTATCTATATCATCTCTGTGtctatttcatctctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcctctctgtatctatatcatctctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcctctctctctgtatctatatcATCTCTGTATCTATATcagctctctctgtatctatatcATCCCTCTTTGTATCTCTATCatctctctctgtatctctatcctctctgtatctctatcatctctctgtatctatatcatccctctctgtatctatatcctctctgtatctctatcatctatctctgtatctctatcctctctctctgtatctatattctctctgtatctatatcctctctctgtagCTATAtcatctctctgtgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcatctctctctgtatctctatcctctctctatttccctctctgtatatctatcatctctctctgtatctatatcacctctccctgtatctctatcatctctctctgtatctctatcctctctgtatctctatcatccctctctgtatctctatcatccctctctgtatctctatcatccctctctgtatctctatcctctctgtatctctatcatctctctctgtatctctatcctctctgtatctctatcatccctctctgtatctctatcatctctctctgtatctctatcatctctctctgtatctatatcCTCCCTGTATCTATATCCTCTCTGTATCTAtatcctctctgctcctctgttctctctctctctatcttctcatTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU649355 True 1075 TUCP 0.38 2 5417307 5418483

Neighbor

gene id symbol gene type direction distance location
LOC110496986 ace2 coding downstream 88324 5310065 ~ 5328983 (-)
LOC110500297 LOC106563837 coding downstream 146633 5253441 ~ 5270674 (-)
LOC110521097 pir coding downstream 164038 5222340 ~ 5253269 (-)
LOC110522577 vegfd coding downstream 196591 5203083 ~ 5220716 (-)
LOC110495407 LOC106574896 coding downstream 273299 5127690 ~ 5190241 (-)
mid1ip1b LOC106574646 coding upstream 107162 5525645 ~ 5527337 (-)
LOC110495503 LOC106574647 coding upstream 109756 5528239 ~ 5552916 (-)
LOC118936247 cybb coding upstream 153821 5572304 ~ 5580483 (-)
LOC118965218 cd3z coding upstream 293845 5712328 ~ 5725194 (-)
LOC110512982 creg1 coding upstream 306849 5725332 ~ 5728460 (-)
G569842 NA non-coding downstream 23626 5393324 ~ 5393681 (-)
G569793 NA non-coding downstream 154299 5262271 ~ 5263008 (-)
G569754 NA non-coding downstream 269019 5147489 ~ 5148288 (-)
G569854 NA non-coding upstream 8758 5427241 ~ 5427639 (-)
G569855 NA non-coding upstream 9708 5428191 ~ 5430524 (-)
G569875 NA non-coding upstream 77083 5495566 ~ 5495767 (-)
G569876 NA non-coding upstream 77459 5495942 ~ 5496153 (-)
G569877 NA non-coding upstream 77694 5496177 ~ 5496422 (-)
G569728 LOC106565892 other downstream 352221 5062308 ~ 5065086 (-)
LOC110516650 gtf3c3 other downstream 551555 4858173 ~ 4878929 (-)
LOC110512788 LOC106595034 other downstream 589403 4770818 ~ 4854775 (-)
G569646 NA other downstream 592203 4824631 ~ 4825104 (-)
G571076 NA other upstream 348335 5766818 ~ 5777240 (-)
G571129 LOC100136391 other upstream 476532 5895015 ~ 5902590 (-)
G571160 LOC106575668 other upstream 622685 6041168 ~ 6050002 (-)
G571166 LOC100380696 other upstream 672803 6091286 ~ 6111137 (-)
LOC110495631 LOC106575789 other upstream 1431984 6850467 ~ 6863766 (-)

Expression

G569846 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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G569846 Expression in each Bioproject

Bar chart with 11 bars.
G569846 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network