Gene
RNA
| Item | Value |
|---|---|
| gene id | G569896 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 5509054 ~ 5509273 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU649412 | True | 220 | lncRNA | 0.71 | 1 | 5509054 | 5509273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511234 | nhs | coding | upstream | 93330 | 5346088 ~ 5415724 (+) |
| il-1ra | il-1ra | coding | upstream | 198935 | 5283573 ~ 5310119 (+) |
| LOC110496914 | LOC106574890 | coding | upstream | 348814 | 5156752 ~ 5160240 (+) |
| LOC118965217 | LOC106598227 | coding | upstream | 488786 | 4902577 ~ 5020268 (+) |
| LOC110518830 | LOC106591572 | coding | upstream | 558091 | 4923178 ~ 4950963 (+) |
| LOC110497009 | LOC106574645 | coding | downstream | 44702 | 5553975 ~ 5570108 (+) |
| LOC110495508 | dylt3 | coding | downstream | 61007 | 5570280 ~ 5573985 (+) |
| LOC118965336 | LOC106575727 | coding | downstream | 133666 | 5642939 ~ 5675533 (+) |
| LOC110495514 | dusp27 | coding | downstream | 176199 | 5685472 ~ 5699781 (+) |
| LOC110513828 | LOC106574713 | coding | downstream | 191175 | 5700448 ~ 5710860 (+) |
| G569890 | NA | non-coding | upstream | 3686 | 5505128 ~ 5505368 (+) |
| G569883 | NA | non-coding | upstream | 7548 | 5500928 ~ 5501506 (+) |
| G569882 | NA | non-coding | upstream | 8275 | 5500526 ~ 5500779 (+) |
| G569863 | NA | non-coding | upstream | 23283 | 5485367 ~ 5485771 (+) |
| G569857 | NA | non-coding | upstream | 60560 | 5448275 ~ 5448494 (+) |
| G569909 | NA | non-coding | downstream | 35582 | 5544855 ~ 5545451 (+) |
| G569970 | NA | non-coding | downstream | 141301 | 5650574 ~ 5739526 (+) |
| G569920 | creg1 | non-coding | downstream | 216056 | 5725329 ~ 5728437 (+) |
| G569997 | NA | non-coding | downstream | 315124 | 5824397 ~ 5824674 (+) |
| G570006 | NA | non-coding | downstream | 329676 | 5838949 ~ 5839226 (+) |
| G569218 | LOC106591403 | other | upstream | 612982 | 4894068 ~ 4896072 (+) |
| G569207 | NA | other | upstream | 640540 | 4868117 ~ 4868514 (+) |
| LOC118965333 | cfap47 | other | upstream | 1192594 | 4278763 ~ 4318486 (+) |
| G568631 | NA | other | upstream | 1864096 | 3644249 ~ 3644958 (+) |
| G568263 | NA | other | upstream | 2109159 | 3398832 ~ 3406995 (+) |
| LOC110497014 | LOC106575751 | other | downstream | 262688 | 5771961 ~ 5775857 (+) |
| G569923 | NA | other | downstream | 267038 | 5776311 ~ 5776819 (+) |
| G570065 | ipo5 | other | downstream | 512859 | 6022132 ~ 6024311 (+) |
| LOC110518527 | nud15 | other | downstream | 528614 | 6037832 ~ 6038818 (+) |
| G570105 | NA | other | downstream | 635812 | 6145085 ~ 6147543 (+) |
