Gene
RNA
| Item | Value |
|---|---|
| gene id | G570030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 5915612 ~ 5916039 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 40 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU649560 | True | 268 | lncRNA | 0.46 | 2 | 5915612 | 5916039 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528727 | LOC106575754 | coding | upstream | 12996 | 5890321 ~ 5902616 (+) |
| LOC110527204 | LOC106574654 | coding | upstream | 120011 | 5791307 ~ 5795601 (+) |
| LOC110527200 | LOC106575752 | coding | upstream | 124458 | 5786942 ~ 5791154 (+) |
| LOC118965221 | LOC106575751 | coding | upstream | 130886 | 5781376 ~ 5784726 (+) |
| LOC110497014 | LOC106575751 | coding | upstream | 139755 | 5771961 ~ 5775857 (+) |
| LOC110497016 | LOC106575665 | coding | downstream | 56801 | 5972840 ~ 5979711 (+) |
| LOC118965225 | NA | coding | downstream | 103121 | 6019160 ~ 6019827 (+) |
| LOC110518527 | nud15 | coding | downstream | 121793 | 6037832 ~ 6038818 (+) |
| LOC110527224 | LOC105019714 | coding | downstream | 170044 | 6086083 ~ 6129077 (+) |
| LOC110495537 | LOC106574870 | coding | downstream | 313887 | 6229926 ~ 6255588 (+) |
| G570006 | NA | non-coding | upstream | 76386 | 5838949 ~ 5839226 (+) |
| G569997 | NA | non-coding | upstream | 90938 | 5824397 ~ 5824674 (+) |
| G569970 | NA | non-coding | upstream | 176086 | 5650574 ~ 5739526 (+) |
| G569920 | creg1 | non-coding | upstream | 187175 | 5725329 ~ 5728437 (+) |
| G569909 | NA | non-coding | upstream | 370161 | 5544855 ~ 5545451 (+) |
| G570042 | NA | non-coding | downstream | 18594 | 5934633 ~ 5934956 (+) |
| G570044 | NA | non-coding | downstream | 20280 | 5936319 ~ 5936625 (+) |
| G570062 | NA | non-coding | downstream | 53217 | 5969256 ~ 5969608 (+) |
| G570070 | LOC106575703 | non-coding | downstream | 90645 | 6006684 ~ 6008048 (+) |
| G570089 | NA | non-coding | downstream | 143972 | 6060011 ~ 6060929 (+) |
| G569923 | NA | other | upstream | 138793 | 5776311 ~ 5776819 (+) |
| G569218 | LOC106591403 | other | upstream | 1019540 | 4894068 ~ 4896072 (+) |
| G569207 | NA | other | upstream | 1047098 | 4868117 ~ 4868514 (+) |
| LOC118965333 | cfap47 | other | upstream | 1599152 | 4278763 ~ 4318486 (+) |
| G570065 | ipo5 | other | downstream | 106093 | 6022132 ~ 6024311 (+) |
| G570105 | NA | other | downstream | 229046 | 6145085 ~ 6147543 (+) |
| G570118 | NA | other | downstream | 251312 | 6167351 ~ 6168120 (+) |
| G570182 | NA | other | downstream | 534171 | 6450210 ~ 6452314 (+) |
