G570065 (ipo5)


Basic Information

Item Value
gene id G570065
gene name ipo5
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 6022132 ~ 6024311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU649598
CATGTGGTTTATTTTTTGTTCAGGGTAAAATCAACTTTCCTTATTTCAATAATGTATAATAAACCTACATTGCAGTGAAAGTGACAACCCATGCATTACATTAATGCATTATGACAAATTCTGCCAATCTGAAATGTATTGTTGACATCCACCAAATATCTGCAGGGGTGCTAAGGTTCTAAACCAAATGTTAGCGGAGGATGGATGCACACATTAAGTCTATTCCATGCGTCTACATGTCTATAACCCAGCACATTGTGGCTAAGACACTTAATCCTAAACCAACTTCATTCAATTGGTGTAAACCTTCATGAAAAACAAACCTACATTTATACAGGGTTTCAGGGAAAGGAAAATAACACCTAAAGTGTTTGTTTTAAATCTCCTAGACAGACAATCATGATTTCCTCACTCATTTATTAAAGGAGAGCTTGAGTTAGCCACTGACACATGCTGTTAGTCTTGAGAATAGACAGATTCAGATCAGTGAGCCAACAGCATACAGAGGCCGTTTCCTCCAGGTGCCACCGTGCGGCTCTGTCAGAAAGACAAACAAAAAAAGcctaaacaaaaaaacaaaattcaGAGGCAGGAAGTGGTCACCCCATGACATGTACACACTCCCCTCTTCCATTCCCCAGTCCTCTAGTCAACACTCCTCGTACAGCAGCTGGGTCCTACCAAGTCTGATACTTCTAGGAGTTTATTACAGCTGGGTAAACATGACATTTTCACATGGTTCCACAGAGCACAACTACACCAGTTAAACTTGTGGTGGAAAGGGTTAAGTCAATTTCATCAAAAGACCAGATGATTCTGAACAGTGTAACAGGATGGAGAAGAAACTGAATTAATACTTGTGTTCATTTGTTTTCCCTTTGTGGAGGTGAGGCCAACAACGCTCCAACCGTCAGGATTCAGGAAGAAGAGGGTATAGACCACTCCAGTGGGCGATAACACATTAGTGACTTAAAGGGGAGGGGTCATCCTCTGGAGGGGGCAGGGTCTTATTGACAGTCACTCAGACAAATCAACCTGGTCCCTACAGTTAGTCGAGTGCAGGGGAGACTGACTGGATAGGGAGGGGGGCAGCAGGAGGCTGCAGTGAAGTCCACACACGCTACAGATCAGAGATGGAAAAGGAGatgggagggaggtggtgatCTAGGAAGGAGGAGATCCAGGAGCTAGATGTTTAAACATGGTCTTGTTGTTTTCCAACAAAGGAAGGGGATAAGGCTTCTCAAGCAGTGTTgaggaggtcctggatggcctTCTGTTGAGTCTCGTTCAGCATCGTGACACACTGGGtccacagtcctccagaaccCTGTACTTGGCGGATGACATTTGCCAATCTCTTGCTGCATGCATCCTCACTCTTGACCGACTCGTTGGCGACCCCTTCAGCGATGATCTGGAATATCTTGGGAAGATTTGCATTGTCTGGTCCGAGGACAATAGGATTGTTGCTTTCGATAAGGTCACAAAGGAAGTCAAAGGTGTGCACAGCTTCCTCCTTGTCTTCGTTGAGTGGCAGCCAGGAGAGCCAATGGGGAAGGATCTCGTTGACATTGGCACACTCAGGCCTGAATCTCATGACCTTGCCCACGGCTGATATGCAGTTCTCTGTGGCGTTGACGTTCTCCTTGACCTTGGAGTCTGGAGACTGGATCACACCCAACAGCGTGGGCAGTGCCTCTGGAGGAGAGGATAACCAGAGTCAGGAGAGGG

Function

symbol description
ipo5 Enables RNA binding activity. Involved in ribosomal protein import into nucleus. Located in membrane.

NR:

description
importin-5-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU649598 True 1734 TUCP 0.46 3 6022132 6024311
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118965225 NA coding upstream 2305 6019160 ~ 6019827 (+)
LOC110497016 LOC106575665 coding upstream 42421 5972840 ~ 5979711 (+)
LOC118965222 NA coding upstream 99550 5914910 ~ 5922582 (+)
LOC110528727 LOC106575754 coding upstream 119516 5890321 ~ 5902616 (+)
LOC110527204 LOC106574654 coding upstream 226531 5791307 ~ 5795601 (+)
LOC110518527 nud15 coding downstream 13521 6037832 ~ 6038818 (+)
LOC110527224 LOC105019714 coding downstream 61772 6086083 ~ 6129077 (+)
LOC110495537 LOC106574870 coding downstream 205615 6229926 ~ 6255588 (+)
LOC110497020 LOC106574871 coding downstream 242942 6267253 ~ 6276247 (+)
LOC110527231 ck073 coding downstream 294765 6319076 ~ 6325551 (+)
G570070 LOC106575703 non-coding upstream 14084 6006684 ~ 6008048 (+)
G570062 NA non-coding upstream 52524 5969256 ~ 5969608 (+)
G570044 NA non-coding upstream 85507 5936319 ~ 5936625 (+)
G570042 NA non-coding upstream 87176 5934633 ~ 5934956 (+)
G570030 NA non-coding upstream 106093 5915612 ~ 5916039 (+)
G570089 NA non-coding downstream 35700 6060011 ~ 6060929 (+)
G570091 NA non-coding downstream 43675 6067986 ~ 6068264 (+)
G570092 NA non-coding downstream 44155 6068466 ~ 6068666 (+)
G570094 NA non-coding downstream 48031 6072342 ~ 6072753 (+)
G570099 pur9 non-coding downstream 107589 6131900 ~ 6138765 (+)
G569923 NA other upstream 245313 5776311 ~ 5776819 (+)
LOC110497014 LOC106575751 other upstream 248002 5771961 ~ 5775857 (+)
G569218 LOC106591403 other upstream 1126060 4894068 ~ 4896072 (+)
G569207 NA other upstream 1153618 4868117 ~ 4868514 (+)
LOC118965333 cfap47 other upstream 1705672 4278763 ~ 4318486 (+)
G570105 NA other downstream 120774 6145085 ~ 6147543 (+)
G570118 NA other downstream 143040 6167351 ~ 6168120 (+)
G570182 NA other downstream 425899 6450210 ~ 6452314 (+)
LOC118965228 LOC106575690 other downstream 507347 6531104 ~ 6533547 (+)

Expression

G570065(ipo5) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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G570065(ipo5) Expression in each Bioproject

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G570065(ipo5) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network