XLOC_025093



Basic Information


Item Value
gene id XLOC_025093
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10953807 ~ 10999810 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052605
TAATATTACAACAAATGATCTAAAGCCATTCACtaattttataattgtactgatttTTTATCATCCAATGCAGTCTTTAACATACATCTTGGAATGCTTTTCCATTGTCTATGTACCTTTTGCTGTTTGtgactttttcattttaaattatggcCGGGAGAACTtcccttaaaaaaataattgtaaataattattctgACTACTTTGACATAATACTCTAtcattcaaaaatatataaatcaTTTATCTGATTGAAGGCACGTGTGAATGCATGTCATTCCACATTCACAAAACTAGTGTATAATCTGCACCGAATGAGAACTGACGGAGCTCCTCGACAAGATTATATCACCTATTCTCGACAGGTGAAAATCAGGGGTAAAACTAGCTAAAAACCACCAGATCTTAACATGGTGGCTAAAGTACATTTATTGGCCCCTATACTTTCCTGACTTTTCACAACACAATTATGATCATAATTGCTACACTTTTTCAGTAAATTCACTTCGAAATGCATTAATAACAATAGTACAAAGGATAGCTTCtgtattatataaactttatataaACTACAAATTAtaggttattattatttctag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052605 True 599 lncRNA 0.31 2 10953807 10999810

Neighbor


gene id symbol gene type direction distance location
XLOC_025091 NA coding upstream 15401 10933486 ~ 10938406 (+)
XLOC_025090 NA coding upstream 204462 10746400 ~ 10749345 (+)
XLOC_025089 tmem220 coding upstream 311927 10637330 ~ 10641880 (+)
XLOC_025088 NA coding upstream 722532 10179891 ~ 10231275 (+)
XLOC_025087 cbx2 coding upstream 789048 10152092 ~ 10164759 (+)
XLOC_025095 mrps7 coding downstream 73148 11072958 ~ 11075476 (+)
XLOC_025096 sstr5 coding downstream 101775 11101585 ~ 11122914 (+)
XLOC_025097 NA coding downstream 188613 11188423 ~ 11198265 (+)
XLOC_025098 NA coding downstream 326352 11326162 ~ 11333666 (+)
XLOC_025099 NA coding downstream 387128 11386938 ~ 11388541 (+)
XLOC_025429 BX649540.1 misc downstream 19248929 30248739 ~ 30249036 (+)
XLOC_025086 NA non-coding upstream 1228425 9723796 ~ 9725382 (+)
XLOC_025081 CR926128.8 non-coding upstream 1911712 9041989 ~ 9042095 (+)
XLOC_025102 NA non-coding downstream 576865 11576675 ~ 11580720 (+)
XLOC_025103 NA non-coding downstream 855510 11855320 ~ 11858803 (+)

Expression



Co-expression Network