XLOC_025099


Basic Information

Item Value
gene id XLOC_025099
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 11386938 ~ 11388541 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052608
aAATCTAAGATGAGTCTTTAGCCGTGTAGCTGCCAAAAATGATTTAccgcattgatcacatttgtgtgttttcacTCCAGTGTGGATCAACATGTGATTATTAAGGGATGCTGATCGTCCataactcttcccacactgagtacatgtgtacggtttctctccagtgtgaatcctctcatgtattttctggttttgtaactgactgaatctcttgtcgcagtgtgaacacttgaacagtttctctccagtgtgaatcatctcatgTGATTTCTGACTTTCTAATCGATTGAATCTCTtttcgcagtgtgaacacttgtaaggtttctctcctgTGTGAATCATCTGGTGCCTTTTCAATTGATGAGCTCTAAGAAAAGTTTtatcacactcaaagcacatatactctttcacaccagtgtgaatCTTCTGATGTCCTCTTAAATATGACTGCCTtgaaaaactctttccacacacagAACATGAATAAGGCTTCTCCTTCGTATGAACTCTAAGATGAGCCTTCAGATATGCAGCTCTCAAAAATGATTTAccgcattgatcacatttgtgtgatctctctccagtgtggatcaaccTGTGattattaaggtatgatgagtttatgaaactcttcccacactgagtacatgtgtacggtctctctccagtgtgaatagTCATGTGTAGAGTAAGGTTTGATGATtgtctaaaactcttcccacactgagtacatgtgtacggtctctctccagtgtgaataaTCATGTGTTGAGTAAGGGAAGATGATtgtctaaaactcttcccacacatagcacatgtgtatggtttctctccagtgtggatcctcatgtgaatttcAAGAGAACTTTTACGtcccaaactctttccacactgactgcaggtgaaacaattcttgtcttttcttttaattaaaaaagtaccTTCAGTCAGTAAATGGGGCATTTTGTCAGCGTTTACAGGTTTGTCATCCTCACTCTTATCGTCTTCAATAAAGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052608 True 1016 lncRNA 0.39 2 11386938 11388541

Neighbor

gene id symbol gene type direction distance location
XLOC_025098 NA coding upstream 53272 11326162 ~ 11333666 (+)
XLOC_025097 NA coding upstream 188673 11188423 ~ 11198265 (+)
XLOC_025096 sstr5 coding upstream 264024 11101585 ~ 11122914 (+)
XLOC_025095 mrps7 coding upstream 311462 11072958 ~ 11075476 (+)
XLOC_025094 NA coding upstream 330015 10991040 ~ 11056923 (+)
XLOC_025100 mmd coding downstream 159975 11548516 ~ 11576337 (+)
XLOC_025101 CABZ01087224.1 coding downstream 179982 11568523 ~ 11587609 (+)
XLOC_025102 NA coding downstream 188134 11576675 ~ 11580720 (+)
XLOC_025103 NA coding downstream 466779 11855320 ~ 11858803 (+)
XLOC_025104 dnaja3a coding downstream 537489 11926030 ~ 11947672 (+)
XLOC_025429 BX649540.1 misc downstream 18860198 30248739 ~ 30249036 (+)
XLOC_025093 NA non-coding upstream 387128 10953807 ~ 10999810 (+)
XLOC_025092 NA non-coding upstream 392333 10943127 ~ 10994605 (+)
XLOC_025105 NA non-coding downstream 686347 12074888 ~ 12075135 (+)
XLOC_025106 NA non-coding downstream 688311 12076852 ~ 12081373 (+)
XLOC_025107 NA non-coding downstream 851151 12239692 ~ 12264458 (+)

Expression


Co-expression Network