G570638


Basic Information

Item Value
gene id G570638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7536913 ~ 7537374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650387
gtgttAATACtcacctctagtccagtgagggggctatctatggctctgatgctgctgtgtattcacctctagttcagtgagggggctatccatggctctgatgctgctgtgtattcacctctagtccagtgagggggctatctatggctctgatgctgctgtgtaaatactcacctctagtccagtgagggggctatccatggctctgatgctgctgtgtattcacctctagtccagtgaggtgtaaatattcacctctagtccagtgagggggctatccatggctctgatgctgctgtgtattcacctctagtccagtgaggtgtaaatattcacctctagtccagtgaggtgtaaatattcacctctagtccagtgagggggctatccatggctctgatgctgctgtgtatTCACCTCTAGTCAAGTGAGGTGTAaatattcacctctagtccagtgagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU650387 True 462 lncRNA 0.49 1 7536913 7537374

Neighbor

gene id symbol gene type direction distance location
LOC110495398 rnd3 coding upstream 13072 7504010 ~ 7523841 (+)
LOC118965230 NA coding upstream 65645 7467740 ~ 7471268 (+)
LOC110496979 LOC106574832 coding upstream 71234 7434922 ~ 7465679 (+)
LOC110528841 LOC106575888 coding upstream 213784 7318245 ~ 7323129 (+)
LOC110528848 LOC105022557 coding upstream 220201 7311121 ~ 7316712 (+)
LOC118965425 NA coding downstream 43740 7580087 ~ 7582949 (+)
LOC118965426 NA coding downstream 46146 7583520 ~ 7583673 (+)
LOC110495388 mmadhc coding downstream 87100 7624474 ~ 7632875 (+)
LOC118965231 LOC106593490 coding downstream 136171 7673545 ~ 7676737 (+)
LOC110491192 orc4 coding downstream 192092 7729466 ~ 7734571 (+)
G570637 NA non-coding upstream 1536 7534984 ~ 7535377 (+)
G570627 NA non-coding upstream 27818 7508630 ~ 7509095 (+)
G570622 NA non-coding upstream 33353 7503300 ~ 7503560 (+)
G570621 NA non-coding upstream 37824 7498866 ~ 7499089 (+)
G570619 NA non-coding upstream 41494 7494860 ~ 7495419 (+)
G570639 NA non-coding downstream 118 7537492 ~ 7537804 (+)
G570645 NA non-coding downstream 14178 7551552 ~ 7551874 (+)
G570651 NA non-coding downstream 37921 7575295 ~ 7580028 (+)
G570516 NA non-coding downstream 47162 7584536 ~ 7585026 (+)
G570616 NA other upstream 49315 7487205 ~ 7487598 (+)
G570601 LOC100846954 other upstream 96165 7438559 ~ 7440748 (+)
G570541 NA other upstream 230262 7304962 ~ 7306651 (+)
LOC110495616 LOC106574734 other upstream 702619 6805822 ~ 6834301 (+)
LOC110528754 LOC106575679 other upstream 770767 6761084 ~ 6767166 (+)
LOC118965232 LOC106575843 other downstream 285739 7822703 ~ 7827097 (+)
LOC110495467 LOC100653484 other downstream 392414 7900629 ~ 7934716 (+)
LOC110504762 LOC106573845 other downstream 476492 8008932 ~ 8017366 (+)
LOC110497026 ptprn other downstream 498298 8009587 ~ 8061480 (+)
G570827 LOC107379067 other downstream 525733 8063107 ~ 8071558 (+)

Expression


Co-expression Network