G571748


Basic Information

Item Value
gene id G571748
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7574827 ~ 7578444 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU651783
gggccggtccgaattatttatggaaggtctgatgatgattttttttttttttcaccatctctttctctctctgccggggccggccaagagtgctttatggacggtttaaaacatgactatggatgcaaatgctcattttcctccgtgcacctggtgattgaaaacgtgcatctggtaacccaaaaattataaaactgttttaaatacttttacccgtcattctattgatatagcccgctaggggagtgccccactacggccctctctctgtcagggccgtccttgagtgctttttagacagtttaagaaatcacgatggatgcagattgctattaatcctccgtgcaactggtgattgaaaacgtgcatctggtaacccaaaatttcaaatatggttcaaaatgaatttaaaggcacccctctcattgttccccgctatgggagcaccccactaaggccctgtctcggtcggggccgtcctgagtgctttatagacactttaagaaatcgcgatggatgcagattgctattaatcctccgtgcaactggtgattgaaaacgtgcatctggtaacccaaaatttcaaatatggttcaaaatgaatttaaaggcacccctctcattgttccccgctatgggagcaccccactaaggccctgtctcggtcggggccgtcctgagtgctttatagacactttaagaaatcgcgatggatgcagattgctattaatcctccgtgcaactggtgattgaaaacgtgcaactggtgattgaaaacgtgcacctggtcacccaaaacacggttctctatgcggttagcggtgttcccgagattcatgtccgataatgatgcaccctactacggaccttttcaatgggggccggtccgaattatttatggaaggtctgatgatgattttttttttttttcaccatctctttctctctctgccggggccggccaagagtgctttatggacggtttaaaacatgactatggatgcaaatgctcattttcctccgtgcacctggtgattgaaaacgtgcatctggtaacccaaaaattataaaacggttttaaatacttttacccgtcattctattgatatagcccgctaggggagtaccctactacggccctctctcggtcaggcccgtccttaggtgctttatatacagtttcatatattacgatggatgcagattgtgattgttttccaaaagacccgtgtgcatctggtaacccaaaaattaaaatatggttcaaaacccgggtaacaccactctatttacggacatgacagtagagcttaccccctggagctattgacctccaggcttgtaggcccttactcaccacccgggtatcacccctctatttcggggatgacaccagcaggggaccccccccacctccacaacctcgcataccaggtgaaccagggcacccacacttaagcacccctcctcggacattaaagcagataaccgcgctgttatgaaccgcgtgcacctggtcacccaaatggaacttgtgcacctggtcacccaaatggaacttgtgcacctggtcacccaaagaccggcgtgcacctggtcacccaaaggccggcgtgcacctggtcacccaaaggccggcgtgcacctggtcacccaaaaggaccatgtgcacctggtcacccaaaggccggcgtgcacctggtcacccaaaggaccatgtgcacctggtcacccaaaaggaccatgtgcacctggtcacccaaaggccggcgtgcacctggtcacaattccagtcggtcagaagtttacatacagtaagttgacagTGCCATTAAACAGCGTGGAAAAGTCCtaggaaatgatgtcatggctttagaagcttctgataggctaattgacattatttgagtcaattggaggtgcacctgtggatgtatttcaaggcctaccttcaaactcagtgcctctttgcttgacatcataggaaaatcaaaagaaatcagccaagatctcagaaagaaaattgtggacctctacaagtctgattcatccttgggagcaatttgctgcaggagggactggtgcacttcacaaaatagatggcctcatgaggaAGGCAAATTAGGTTGATatcttgaagcaacatctcaagacatcagtcaggaagttaaaacttggtcgcaaatgggccttcttaatggacaatgacctcaaacatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgaactcatcctatagaacatttgtgggcagaactgaaaaagcgtgtgtgagcaaggaggcctgaaaacctgactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacctgaaacgtttgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU651783 True 2453 TUCP 0.47 2 7574827 7578444
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110496980 zranb3 coding downstream 161679 7335591 ~ 7413148 (-)
zc3h13 LOC106575915 coding downstream 263804 7295350 ~ 7311023 (-)
LOC110528722 cfap47 coding downstream 291382 7270624 ~ 7283445 (-)
LOC110511494 cfap47 coding downstream 306446 7245458 ~ 7268381 (-)
LOC118965339 cfap47 coding downstream 329598 7224217 ~ 7245229 (-)
LOC110495391 lypd6 coding upstream 55238 7633682 ~ 7659195 (-)
LOC110492730 LOC105022551 coding upstream 97363 7675807 ~ 7707876 (-)
LOC110512526 mbd5 coding upstream 129733 7708177 ~ 7728376 (-)
LOC110495501 LOC106574754 coding upstream 194320 7772764 ~ 7777537 (-)
cbs cbs coding upstream 204839 7783283 ~ 7801248 (-)
G571741 NA non-coding downstream 22477 7552115 ~ 7552350 (-)
G571737 NA non-coding downstream 36618 7537904 ~ 7538209 (-)
G571735 NA non-coding downstream 39299 7535191 ~ 7535528 (-)
G571727 rnd3 non-coding downstream 51713 7521779 ~ 7523114 (-)
G571730 NA non-coding downstream 65510 7508601 ~ 7509317 (-)
G571750 NA non-coding upstream 5760 7584204 ~ 7585005 (-)
G571758 NA non-coding upstream 23692 7602136 ~ 7602396 (-)
G571781 NA non-coding upstream 42118 7620562 ~ 7621906 (-)
G571782 NA non-coding upstream 44516 7622960 ~ 7623185 (-)
G571768 LOC100194579 non-coding upstream 48735 7627179 ~ 7632871 (-)
G571715 NA other downstream 101186 7473368 ~ 7473641 (-)
G571637 NA other downstream 258750 7315228 ~ 7316077 (-)
G571538 NA other downstream 542964 7026700 ~ 7031863 (-)
LOC110495631 LOC106575789 other downstream 711061 6850467 ~ 6863766 (-)
G571862 NA other upstream 323737 7902181 ~ 7902649 (-)
G571906 LOC106574801 other upstream 401016 7979460 ~ 7992063 (-)
LOC110495546 dnpep other upstream 418692 7997136 ~ 8012937 (-)
LOC110495565 LOC107659949 other upstream 485937 8063093 ~ 8074228 (-)

Expression

G571748 Expression in all Baseline Samples

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G571748 Expression in each Bioproject

Bar chart with 20 bars.
G571748 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network