G570516


Basic Information

Item Value
gene id G570516
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7584536 ~ 7585026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650214
gttccggtgtggtcggatcccctcgtgggactgatccctggtcgggctcggcccccgccgggcgcatttcctctgtcggtggtgcgccgcgaccggctctgggtcggcttggaagggcttggggcgaaggtggctaccggtttcggccgtgagctttacagcgcccctgctccgtactcgccgctttccggggccgaggacttagtacccgctgcgtcatgtccccctgcgggggggcacggggccccttgcccccggcgcgacagtcaaccgggtcggactgtcctcagtgcgtacccaaccgcgttgcgtcgccagggtagggatcggctcacgtcaactggcgccaggggtcagcggcgatgtcggcaacccacccgacccgtcttgaaacacggaccaaggagtctaacgcatgcgcaagtcagagggttttctccgaacacaccccgtggcgcaatgaaagtgagggccggcgcgtgtcggctgag

Function

NR:

description
uncharacterized protein LOC111196389

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU650214 True 491 lncRNA 0.68 1 7584536 7585026

Neighbor

gene id symbol gene type direction distance location
LOC118965426 NA coding upstream 863 7583520 ~ 7583673 (+)
LOC118965425 NA coding upstream 1587 7580087 ~ 7582949 (+)
LOC110495398 rnd3 coding upstream 60695 7504010 ~ 7523841 (+)
LOC118965230 NA coding upstream 113268 7467740 ~ 7471268 (+)
LOC110496979 LOC106574832 coding upstream 118857 7434922 ~ 7465679 (+)
LOC110495388 mmadhc coding downstream 39448 7624474 ~ 7632875 (+)
LOC118965231 LOC106593490 coding downstream 88519 7673545 ~ 7676737 (+)
LOC110491192 orc4 coding downstream 144440 7729466 ~ 7734571 (+)
LOC110491194 hsf2bp coding downstream 150548 7735574 ~ 7745976 (+)
LOC110491195 NA coding downstream 162161 7747187 ~ 7748423 (+)
G570651 NA non-coding upstream 4508 7575295 ~ 7580028 (+)
G570645 NA non-coding upstream 32662 7551552 ~ 7551874 (+)
G570639 NA non-coding upstream 46732 7537492 ~ 7537804 (+)
G570638 NA non-coding upstream 47162 7536913 ~ 7537374 (+)
G570659 NA non-coding downstream 30365 7615391 ~ 7615783 (+)
G570662 NA non-coding downstream 43609 7628635 ~ 7629598 (+)
G570665 NA non-coding downstream 59733 7644759 ~ 7659187 (+)
G570671 NA non-coding downstream 69825 7654851 ~ 7656615 (+)
G570674 NA non-coding downstream 75096 7660122 ~ 7660323 (+)
G570616 NA other upstream 96938 7487205 ~ 7487598 (+)
G570601 LOC100846954 other upstream 143788 7438559 ~ 7440748 (+)
G570541 NA other upstream 277885 7304962 ~ 7306651 (+)
LOC110495616 LOC106574734 other upstream 750242 6805822 ~ 6834301 (+)
LOC110528754 LOC106575679 other upstream 818390 6761084 ~ 6767166 (+)
LOC118965232 LOC106575843 other downstream 238087 7822703 ~ 7827097 (+)
LOC110495467 LOC100653484 other downstream 344762 7900629 ~ 7934716 (+)
LOC110504762 LOC106573845 other downstream 428840 8008932 ~ 8017366 (+)
LOC110497026 ptprn other downstream 450646 8009587 ~ 8061480 (+)
G570827 LOC107379067 other downstream 478081 8063107 ~ 8071558 (+)

Expression


Co-expression Network