G570683 (LOC106574758)


Basic Information

Item Value
gene id G570683
gene name LOC106574758
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7690214 ~ 7691001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650453
ggttgaagagcatgtatttagttttgcttgtatttaagagcaattggaggccacggaaggagagttgtatggcattgactgCTTACATGCAGAACATTTTGGACTGAcagactgtatcaacagtggactaatgagaaacaataccaaaatatagtttttgagtGACATTCTCCTTTAACATGAGAAAAGAGGGTTGTTCATGATTGGTCACCTCATCCTGGTCTAACATCTGTTCCTTGAGtttctcagccagctggctctgCTGGTTGATCTCATCATCCTTGTTGACCTTGTCGTCCAGTTGTTTGTACAGATTGCTGATGTCCTCCTCATACTTGCTCTTCTCCTCGGTGGAGACCAGAACCAGTCCGTTAGCTGGAGCCATGTTATCTATGATGGGAGTGTTGTCACACGGCTCCAGGTGCTTCTGCTCCTTAGCACTCAGCTGCTCCTCCTCAGGGACGTTCTCACCTGAGACGGGGACAAACAGATTCTCTACCTTGAACTGTGCACTCATTCACTCAATATCTACCATTGGAACACTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU650453 True 545 lncRNA 0.45 2 7690214 7691001

Neighbor

gene id symbol gene type direction distance location
LOC118965231 LOC106593490 coding upstream 13477 7673545 ~ 7676737 (+)
LOC110495388 mmadhc coding upstream 57339 7624474 ~ 7632875 (+)
LOC118965426 NA coding upstream 106541 7583520 ~ 7583673 (+)
LOC118965425 NA coding upstream 107265 7580087 ~ 7582949 (+)
LOC110495398 rnd3 coding upstream 166373 7504010 ~ 7523841 (+)
LOC110491192 orc4 coding downstream 38465 7729466 ~ 7734571 (+)
LOC110491194 hsf2bp coding downstream 44573 7735574 ~ 7745976 (+)
LOC110491195 NA coding downstream 56186 7747187 ~ 7748423 (+)
LOC110491196 LOC106575747 coding downstream 58405 7749406 ~ 7767337 (+)
LOC118965232 LOC106575843 coding downstream 131702 7822703 ~ 7827097 (+)
G570679 NA non-coding upstream 23304 7666445 ~ 7666910 (+)
G570674 NA non-coding upstream 29891 7660122 ~ 7660323 (+)
G570665 NA non-coding upstream 31027 7644759 ~ 7659187 (+)
G570671 NA non-coding upstream 33599 7654851 ~ 7656615 (+)
G570662 NA non-coding upstream 60616 7628635 ~ 7629598 (+)
G570695 NA non-coding downstream 17191 7708192 ~ 7709321 (+)
G570696 NA non-coding downstream 19318 7710319 ~ 7711800 (+)
G570731 NA non-coding downstream 95120 7786121 ~ 7787688 (+)
G570741 LOC106561090 non-coding downstream 106608 7797609 ~ 7798425 (+)
G570742 NA non-coding downstream 107134 7798135 ~ 7798834 (+)
G570616 NA other upstream 202616 7487205 ~ 7487598 (+)
G570601 LOC100846954 other upstream 249466 7438559 ~ 7440748 (+)
G570541 NA other upstream 383563 7304962 ~ 7306651 (+)
LOC110495616 LOC106574734 other upstream 855920 6805822 ~ 6834301 (+)
LOC110528754 LOC106575679 other upstream 924068 6761084 ~ 6767166 (+)
LOC110495467 LOC100653484 other downstream 238787 7900629 ~ 7934716 (+)
LOC110504762 LOC106573845 other downstream 322865 8008932 ~ 8017366 (+)
LOC110497026 ptprn other downstream 344671 8009587 ~ 8061480 (+)
G570827 LOC107379067 other downstream 372106 8063107 ~ 8071558 (+)

Expression


Co-expression Network