G570731


Basic Information

Item Value
gene id G570731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7786121 ~ 7787688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650532
aaaaagtcaagaggtctgaatactttccaaatgcgctgTATACCAGTCACATGCACACAGCAGACATTAAACCAGACTGGTTTAAATGGGTTCAGACCAGCCACCTTACCACCTTGTTACTGCCCTCAAAAAAAGGTCAACGAACCTTCACTCCTCTTATCGCAACATGTTCACCATTATAGCAGGCAGAAAGACTTACATTGGATCTGTTCGTGTACCACCAGGGCAAAATGGTCCGTCTCCAGGATACGAGAGAGCTTCCCCAGGTTATCAGTCAGACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAAACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAAACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAGACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAGACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAAACGGATCTGAGAATAGGATGAGACGTGAGGTTATCAGTCAGACGTAAGATAGAGACGACCGTTTCATCATATAAACAAACATGGGTgatttcagtgtgtgtgagacCTATTTGCACTACTTACAGAAAAAGTGTGCCTgcaaacacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagactgaccTGTTTGAACTGGGTGTAGATCACCTTGTTGACTGGGTCTGAGGGTTTGATCTTCCCAGCCAGCACAGAGGCCAGCATATTCCCCAAAGTAACCATTCCTAGGACCagcctacacacactcacacacggttATTTTAGCAGCAGAACAACACTAACCCATGGATAATGTCACCAGAACAGTTGAATGACCTGAATCAGATGGTCAATGTCCACAGGTGAAACATGGGTTAACAACATTTACAAATCAACAATACTCATGAATTTAATTCCAGGGTTATTTCAATGGAAGATATTTTCAGATTCTCTACAACCATTTAATTTCTTCACCGTGAACTAGTAAGCGACACAAAGATAATGGatatgtccaaaatgggaaacgtCCTCTGGTTAATGAAAGAGGCAGGAGAtgagacagtggaggaggacaccCACCCAGCCTCGTCCACTACAGGGGCCTGGTCAAAGCCGTTCTCCTTCAGGATCTTGATGGTCTTCTGACAGCTGACCGTGGGCAGGACGGTCAGAGGGGCAGAGAGGTTCAACCCCTGCAGCTTCAGGTTCCACcacctggggagggagggagagagagagagaaatagagggagggagagagagagaaatagagggagggagagag

Function

NR:

description
cystathionine beta-synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU650532 True 1303 lncRNA 0.46 3 7786121 7787688

Neighbor

gene id symbol gene type direction distance location
LOC110491196 LOC106575747 coding upstream 18784 7749406 ~ 7767337 (+)
LOC110491195 NA coding upstream 37698 7747187 ~ 7748423 (+)
LOC110491194 hsf2bp coding upstream 40145 7735574 ~ 7745976 (+)
LOC110491192 orc4 coding upstream 51550 7729466 ~ 7734571 (+)
LOC118965231 LOC106593490 coding upstream 109384 7673545 ~ 7676737 (+)
LOC118965232 LOC106575843 coding downstream 35015 7822703 ~ 7827097 (+)
LOC110525651 LOC106575849 coding downstream 107899 7895587 ~ 7900191 (+)
LOC110495467 LOC100653484 coding downstream 112941 7900629 ~ 7934716 (+)
LOC110504762 LOC106573845 coding downstream 221244 8008932 ~ 8017366 (+)
LOC110497026 ptprn coding downstream 230745 8009587 ~ 8061480 (+)
G570696 NA non-coding upstream 74321 7710319 ~ 7711800 (+)
G570695 NA non-coding upstream 76800 7708192 ~ 7709321 (+)
G570683 LOC106574758 non-coding upstream 95120 7690214 ~ 7691001 (+)
G570679 NA non-coding upstream 119211 7666445 ~ 7666910 (+)
G570674 NA non-coding upstream 125798 7660122 ~ 7660323 (+)
G570741 LOC106561090 non-coding downstream 9921 7797609 ~ 7798425 (+)
G570742 NA non-coding downstream 10447 7798135 ~ 7798834 (+)
G570743 NA non-coding downstream 15189 7802877 ~ 7804126 (+)
G570750 NA non-coding downstream 41159 7828847 ~ 7830431 (+)
G570769 NA non-coding downstream 88707 7876395 ~ 7877367 (+)
G570616 NA other upstream 298523 7487205 ~ 7487598 (+)
G570601 LOC100846954 other upstream 345373 7438559 ~ 7440748 (+)
G570541 NA other upstream 479470 7304962 ~ 7306651 (+)
LOC110495616 LOC106574734 other upstream 951827 6805822 ~ 6834301 (+)
LOC110528754 LOC106575679 other upstream 1019975 6761084 ~ 6767166 (+)
G570827 LOC107379067 other downstream 275419 8063107 ~ 8071558 (+)

Expression


Co-expression Network