XLOC_025104 (dnaja3a)


Basic Information

Item Value
gene id XLOC_025104
gene name dnaja3a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 11926030 ~ 11947672 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049627
TATTGCACTTCAACCAAGAGTCTATGCGCATGCCGCTCGCACATGCGCAGTCGCTCTCGTCTCGGTAAGGAGCAAAGATGGCGTGTTCCGCGGCTCGCAGCTCCGCACGCTGGATCTCAGCGGCCGTGTCCTCCAGCCACAGCCGGGCATGCTCACCCTTCATTCCCCGAGCGGATGGAGCCTACAGGGGCTTCAAGAGCCTGTCAGGCCGGCAGATGTGGACGACACGCGGCGGGCTCTCCGGAGGAGCCGGGGCTGCGGTGACATTGAGCGGCATGACAGCTATAGGCTCTTCGCACGTCGTCTGTAAGATGTCATTTCACACCAGCGCTCCTTCAAGAAAACAAGACTTCTACCAGATTTTAGGAGTTCCTCGCTCGGCAACGCAGAAAGAGATCAAGAAAGCTTATTACCAGATGGCCAAAAAGTATCACCCAGACACTAATAAAGAAGACCCTCAAGCTAAGGAAAAGTTTGCACAGCTAGCGGAAGCCTATGAGGTTCTCAGTGACGAGGTAAAGAGGAAACAGTACGACACGTACGGTTCTGCAGGGTTTGATGCGGGTCGCGCCGGTGCGGGACATCAGCAGTATTGGGGTGGAGGGACCAGCATTGACCCGGAGGAGCTTTTCCGCAAGATTTTTGGCGAGTTTTCTGGCGCTCAGGGCTTTGGGGATTTCAACGCCATCTTCAATCAGCCACAAGAGTATGTGATGGAGCTGACATTCGCTCAGGCTGCTAAAGGAGTGAATAAGGAGATCACAGTGAACATCGAGGGCACGTGTCAGCGGTGTGACGGCAGAGGACATGAGCCtgggtctaaagtccagcactgCGGAAATTGTAATGGCACCGGCATGGAGACGGTGAACACGGGACCCTTCGTGATGCGCTCCACCTGCCGGCGCTGTGGAGGGAGAGGTTCGGTCATCACATCACCCTGTATCGCCTGTCGAGGGACGGGACAAACCAAACAAAGGAAAACCGTCACGGTGCCCGTTCCTGCTGGTATTGAGGATGGGCAGACGGTGCGAATGCCTGTTGGGAAGAAAGAGATTTTCATTACGTTCAAAGTCCAGAAGAGTCCGATCTTCAGGAGAGACGGTGCTGACATTCACTCTGACGTCATGATCTCTGTGGCTCAGGCCATCCTGGGTGGCACCATCAGAGCGCAAGGACTTTACGAGACCATCAATCTCTCGATCCCAGTTGGAACCCAAACTGACCAGAGGATCCGGCTGTCTGGTAAAGGTATACCACGGGTCAGCGGATATGGTTACGGTGACCACTACGTCCACATCAAGATCAAAATACCCAAgaTGTTGACGGACCGACAGCGAGCACTTATGATGAGCTATGCGGAGGACGAGTCTGATGTGGAGGGAACCGTCAACGGAGTGACCAGCACCACTGCAGGTAAAAGATCGGCTGGAAACTGAGAGACTTTGCCTTGCTAGTGGAGATTGAGAATTCACTGCAAACATGATGGACTTACAACACCGGAGTCTAACTCGGTTCCTGGAGagctgcagctctgcagagtttagtttcaGCCCTGCTTCAGCACACCTATCTGTGggtatcaaacaagcctaaagcactcgttagttggatcaggtgtgttaaattagggttggaactaaactgtgcagagctgcggctgtccaggaattgagtttgacacccctgacttacAAGAAGTAACATGAACAGCATTGAATTCATCTGGAAAACGCCTCAGATACTACACAGAATGAAGAGCTCTGGACATACAATTGACTTTTAAGAGCAGATCATTGAGGATTTTGATAAACGCACacatgtacactctcagaaataaaagtacgcgaggtgtcactggggtggtacctttttgaaGGGAACACATTTGTATCCAAAGGGTgaatattggtaccttaaaagtatatgTTAGTACCTatacattttaagaggaacacttttttaCTACTTGGGTACTATTGTACATTTGAGATGTTAAAAGGGACCTTTTAGATACAagtttgaacatttttgaaaaggtaccacgtacctttatttctgaaagtgtacagTCTTACCTCAACTTTGTGTTATCAGCCTTAGCACCCACAGCAATGCTATTTCTTGGCTTTGGTCGGTAATTTTATGTTAAGGTTTAACACAGTCAGTTCTATTTTCAGACATTGGAAGTGGATTGACTTCAGTAGAATTATTCATTGGACATTAATGAAGCTCATTGTTCAAGATCGACTTCAGTAGAATTATTCATTGGACATTAATGAAGCTCATTGTTCAAGatctttgttttgtgttaaaaggCTACATCCGTCTGCTTTAGTTGCAGTGTAAATAAACAACtgttaatattaaatcattttaatgtgttgtaGAGATCaatatgtaataattaaaatCTCTGTGACAACTGTA
>TCONS_00049628
AAAAGAGTTGTGTGCCTGTGcacattttgaataatgttgggttattaacgggttcgggctttataaagctgtcaatcaaatgtACCTGTCGGCTCGGGACGACTTCTGTAGGCCTCGGGCCCTATCGGGTGtaacttttatggcccgattaaAGCTCTAGTACACATTATCAACCTCATCGTAATTACActtgaatcaactcatcagaacattagaagagactccaaaaccttaAATGAATgagtcagataagggagacatccaaactATGTACTGTTGGTTTCCCTCCAGGAACAGAGTAGGGAACTACTGCAGTAGAGTATGGGGTGGTCATGCTAACAGGTTAAACCAGTACCTTTCTCTGTCCAGGAGGGGGCAGTAATCAGACTGGGACAGGGCACACAGAGAAAGACGAGGGCATTTTCTCcaaattaaagaaaatgtttagCTCCTCCTGACAGCCACAAACCAGGTAAAAGATCGGCTGGAAACTGAGAGACTTTGCCTTGCTAGTGGAGATTGAGAATTCACTGCAAACATGATGGACTTACAACACCGGAGTCTAACTCGGTTCCTGGAGagctgcagctctgcagagtttagtttcaGCCCTGCTTCAGCACACCTATCTGTGggtatcaaacaagcctaaagcactcgttagttggatcaggtgtgttaaattagggttggaactaaactgtgcagagctgcggctgtccaggaattgagtttgacacccctgacttacAAGAAGTAACATGAACAGCA

Function

symbol description
dnaja3a Predicted to enable several functions, including ATP binding activity; heat shock protein binding activity; and unfolded protein binding activity. Predicted to be involved in mitochondrion organization and regulation of apoptotic process. Predicted to act upstream of or within protein folding and response to heat. Predicted to be active in mitochondrion. Orthologous to human DNAJA3 (DnaJ heat shock protein family (Hsp40) member A3).

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0007005 mitochondrion organization biological_process
GO:0006457 protein folding biological_process
GO:0009408 response to heat biological_process
GO:0005739 mitochondrion cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0031072 heat shock protein binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7837 Predicted to enable several functions, including ATP binding activity; heat shock protein binding activity; and unfolded protein binding activity. Predicted to be involved in mitochondrion organization and regulation of apoptotic process. Predicted to act upstream of or within protein folding and response to heat. Predicted to be active in mitochondrion. Orthologous to human DNAJA3 (DnaJ heat shock protein family (Hsp40) member A3).

Ensembl:

ensembl_id ENSDARG00000058494

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049627 False 2430 mRNA 0.48 11 11926030 11947672
TCONS_00049628 True 771 processed_transcript 0.45 2 11943549 11946957

Neighbor

gene id symbol gene type direction distance location
XLOC_025103 NA coding upstream 67227 11855320 ~ 11858803 (+)
XLOC_025101 CABZ01087224.1 coding upstream 338421 11568523 ~ 11587609 (+)
XLOC_025102 NA coding upstream 345310 11576675 ~ 11580720 (+)
XLOC_025100 mmd coding upstream 349693 11548516 ~ 11576337 (+)
XLOC_025099 NA coding upstream 537489 11386938 ~ 11388541 (+)
XLOC_025105 NA coding downstream 127216 12074888 ~ 12075135 (+)
XLOC_025106 NA coding downstream 129180 12076852 ~ 12081373 (+)
XLOC_025107 NA coding downstream 292020 12239692 ~ 12264458 (+)
XLOC_025108 glis2b coding downstream 374498 12322170 ~ 12335927 (+)
XLOC_025109 vasnb coding downstream 492427 12440099 ~ 12487576 (+)
XLOC_025429 BX649540.1 misc downstream 18301067 30248739 ~ 30249036 (+)
XLOC_025098 NA non-coding upstream 592364 11326162 ~ 11333666 (+)
XLOC_025097 NA non-coding upstream 727765 11188423 ~ 11198265 (+)
XLOC_025122 NA non-coding downstream 891022 12838694 ~ 12854479 (+)
XLOC_025125 LO018183.1 non-coding downstream 1201878 13149550 ~ 13167328 (+)

Expression


Co-expression Network