G571862


Basic Information

Item Value
gene id G571862
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7902181 ~ 7902649 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU651916
gaatgggcaagacaaaagatataagtggctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacg
>TU651917
gaatgggcaagacaaaagatataagtggctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacg
>TU651918
gaatgggcaagacaaaagatataagtggctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacggggtatggtagtaggtgcctttgaacg

Function

NR:

description
PREDICTED: proteoglycan 4-like isoform X7

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU651916 False 307 TUCP 0.50 2 7902181 7902649
TU651917 False 361 TUCP 0.50 2 7902181 7902649
TU651918 True 334 TUCP 0.50 2 7902181 7902649

Neighbor

gene id symbol gene type direction distance location
LOC118965233 LOC106594420 coding downstream 6600 7880435 ~ 7895581 (-)
LOC110525760 LOC106593712 coding downstream 21892 7839247 ~ 7880289 (-)
LOC110527293 LOC106575755 coding downstream 86769 7802875 ~ 7815412 (-)
cbs cbs coding downstream 100933 7783283 ~ 7801248 (-)
LOC110495501 LOC106574754 coding downstream 124644 7772764 ~ 7777537 (-)
LOC110502362 LOC106575847 coding upstream 14654 7917303 ~ 7924347 (-)
LOC118936384 LOC100653484 coding upstream 65237 7967886 ~ 7975265 (-)
LOC110515036 LOC106575849 coding upstream 76560 7979209 ~ 7981536 (-)
LOC110517952 LOC106575840 coding upstream 79768 7982417 ~ 7986957 (-)
LOC118965234 LOC106575849 coding upstream 85258 7987907 ~ 7992087 (-)
G571861 NA non-coding downstream 1388 7900567 ~ 7900793 (-)
G571855 NA non-coding downstream 1986 7899790 ~ 7900195 (-)
G571851 NA non-coding downstream 34623 7865190 ~ 7867558 (-)
G571849 NA non-coding downstream 36081 7859104 ~ 7866100 (-)
G571863 NA non-coding upstream 1316 7903965 ~ 7904187 (-)
G571864 LOC100653484 non-coding upstream 2316 7904965 ~ 7931433 (-)
G571884 NA non-coding upstream 32115 7934764 ~ 7934997 (-)
G571885 NA non-coding upstream 32368 7935017 ~ 7954902 (-)
LOC110512526 mbd5 other downstream 173883 7708177 ~ 7728376 (-)
G571748 NA other downstream 323737 7574827 ~ 7578444 (-)
G571715 NA other downstream 428540 7473368 ~ 7473641 (-)
LOC110496980 zranb3 other downstream 560881 7335591 ~ 7413148 (-)
G571637 NA other downstream 586104 7315228 ~ 7316077 (-)
G571906 LOC106574801 other upstream 76811 7979460 ~ 7992063 (-)
LOC110495546 dnpep other upstream 94487 7997136 ~ 8012937 (-)
LOC110495565 LOC107659949 other upstream 161732 8063093 ~ 8074228 (-)
G571952 NA other upstream 182637 8084364 ~ 8085691 (-)
G571953 NA other upstream 183562 8086211 ~ 8087565 (-)

Expression

G571862 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G571862 Expression in each Bioproject

Bar chart with 19 bars.
G571862 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network