Gene
RNA
| Item | Value |
|---|---|
| gene id | G570776 |
| gene name | LOC106573840 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 7972484 ~ 7975265 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| OX-2 membrane glycoprotein-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU650584 | True | 473 | lncRNA | 0.49 | 2 | 7972484 | 7975265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495467 | LOC100653484 | coding | upstream | 37768 | 7900629 ~ 7934716 (+) |
| LOC110525651 | LOC106575849 | coding | upstream | 72293 | 7895587 ~ 7900191 (+) |
| LOC118965232 | LOC106575843 | coding | upstream | 145387 | 7822703 ~ 7827097 (+) |
| LOC110491196 | LOC106575747 | coding | upstream | 205147 | 7749406 ~ 7767337 (+) |
| LOC110491195 | NA | coding | upstream | 224061 | 7747187 ~ 7748423 (+) |
| LOC110504762 | LOC106573845 | coding | downstream | 33667 | 8008932 ~ 8017366 (+) |
| LOC110497026 | ptprn | coding | downstream | 43168 | 8009587 ~ 8061480 (+) |
| LOC110528741 | LOC106573853 | coding | downstream | 278461 | 8253726 ~ 8301029 (+) |
| LOC110527258 | cacnb4 | coding | downstream | 503481 | 8478746 ~ 8503131 (+) |
| LOC110495575 | LOC106598167 | coding | downstream | 601474 | 8576739 ~ 8578039 (+) |
| G570786 | NA | non-coding | upstream | 68612 | 7903634 ~ 7903872 (+) |
| G570782 | NA | non-coding | upstream | 85400 | 7886770 ~ 7887084 (+) |
| G570775 | NA | non-coding | upstream | 89689 | 7882181 ~ 7882795 (+) |
| G570821 | NA | non-coding | downstream | 1668 | 7976933 ~ 7987474 (+) |
| G570822 | NA | non-coding | downstream | 2070 | 7977335 ~ 7983609 (+) |
| G570824 | LOC106575840 | non-coding | downstream | 5493 | 7980758 ~ 7986344 (+) |
| G570836 | LOC106575840 | non-coding | downstream | 10616 | 7985881 ~ 7991703 (+) |
| G570840 | NA | non-coding | downstream | 23162 | 7998427 ~ 8007219 (+) |
| G570616 | NA | other | upstream | 484886 | 7487205 ~ 7487598 (+) |
| G570601 | LOC100846954 | other | upstream | 531736 | 7438559 ~ 7440748 (+) |
| G570541 | NA | other | upstream | 665833 | 7304962 ~ 7306651 (+) |
| G570827 | LOC107379067 | other | downstream | 87842 | 8063107 ~ 8071558 (+) |
| G570868 | NA | other | downstream | 102480 | 8077745 ~ 8079340 (+) |
| G570875 | NA | other | downstream | 109006 | 8084271 ~ 8085753 (+) |
