G570872


Basic Information

Item Value
gene id G570872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8081509 ~ 8081812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650710
GATTGAATAGAACCATACGTGTTCTGCTAATTTTGATGGAGCTGTTATTCAGAACACCTAAAACAACATTCCTGCTTGACTAATAAAATTATAGTAGAATATGGTGAGTGATTCTACTAGTGTTGGAGATTTTAAAAACAGAAACGGGGAATAATCCTGTAAGACAAAGTTATGCTTGTTATAAGAAGTGGCCAAATGGCAATATTTTTTTGAGAAAGGGTATTGCCCAGATTAGAACCTGTGACCTTCTGGTTTATATCCCAGTGCCTAGTCTACTGTGTCACTAGGGAGGAGGGTATTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU650710 True 304 lncRNA 0.38 1 8081509 8081812

Neighbor

gene id symbol gene type direction distance location
LOC110497026 ptprn coding upstream 20674 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 64143 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 146793 7900629 ~ 7934716 (+)
LOC110525651 LOC106575849 coding upstream 181318 7895587 ~ 7900191 (+)
LOC118965232 LOC106575843 coding upstream 254412 7822703 ~ 7827097 (+)
LOC110528741 LOC106573853 coding downstream 171914 8253726 ~ 8301029 (+)
LOC110527258 cacnb4 coding downstream 396934 8478746 ~ 8503131 (+)
LOC110495575 LOC106598167 coding downstream 494927 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 503221 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 508569 8590381 ~ 8592862 (+)
G570871 NA non-coding upstream 81 8080918 ~ 8081428 (+)
G570870 NA non-coding upstream 656 8080370 ~ 8080853 (+)
G570869 NA non-coding upstream 1284 8079783 ~ 8080225 (+)
G570827 LOC107379067 non-coding upstream 9951 8063107 ~ 8071558 (+)
G570854 NA non-coding upstream 57637 8023627 ~ 8023872 (+)
G570873 NA non-coding downstream 420 8082232 ~ 8082531 (+)
G570874 NA non-coding downstream 1431 8083243 ~ 8084054 (+)
G570877 NA non-coding downstream 5373 8087185 ~ 8087540 (+)
G570876 NA non-coding downstream 6206 8088018 ~ 8088396 (+)
G570880 NA non-coding downstream 11415 8093227 ~ 8093441 (+)
G570868 NA other upstream 2169 8077745 ~ 8079340 (+)
G570875 NA other downstream 2459 8084271 ~ 8085753 (+)
G570834 NA other downstream 58470 8140282 ~ 8140762 (+)
G572315 NA other downstream 568168 8649980 ~ 8650898 (+)
G572476 NA other downstream 840523 8922335 ~ 8922794 (+)
G572449 NA other downstream 848297 8930109 ~ 8933878 (+)

Expression


Co-expression Network