Gene
RNA
| Item | Value |
|---|---|
| gene id | G570874 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 8083243 ~ 8084054 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU650712 | True | 812 | lncRNA | 0.38 | 1 | 8083243 | 8084054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497026 | ptprn | coding | upstream | 22408 | 8009587 ~ 8061480 (+) |
| LOC110504762 | LOC106573845 | coding | upstream | 65877 | 8008932 ~ 8017366 (+) |
| LOC110495467 | LOC100653484 | coding | upstream | 148527 | 7900629 ~ 7934716 (+) |
| LOC110525651 | LOC106575849 | coding | upstream | 183052 | 7895587 ~ 7900191 (+) |
| LOC118965232 | LOC106575843 | coding | upstream | 256146 | 7822703 ~ 7827097 (+) |
| LOC110528741 | LOC106573853 | coding | downstream | 169672 | 8253726 ~ 8301029 (+) |
| LOC110527258 | cacnb4 | coding | downstream | 394692 | 8478746 ~ 8503131 (+) |
| LOC110495575 | LOC106598167 | coding | downstream | 492685 | 8576739 ~ 8578039 (+) |
| LOC110496917 | LOC106595105 | coding | downstream | 500979 | 8585033 ~ 8586714 (+) |
| LOC118965341 | LOC106575870 | coding | downstream | 506327 | 8590381 ~ 8592862 (+) |
| G570873 | NA | non-coding | upstream | 712 | 8082232 ~ 8082531 (+) |
| G570872 | NA | non-coding | upstream | 1431 | 8081509 ~ 8081812 (+) |
| G570871 | NA | non-coding | upstream | 1815 | 8080918 ~ 8081428 (+) |
| G570870 | NA | non-coding | upstream | 2390 | 8080370 ~ 8080853 (+) |
| G570869 | NA | non-coding | upstream | 3018 | 8079783 ~ 8080225 (+) |
| G570877 | NA | non-coding | downstream | 3131 | 8087185 ~ 8087540 (+) |
| G570876 | NA | non-coding | downstream | 3964 | 8088018 ~ 8088396 (+) |
| G570880 | NA | non-coding | downstream | 9173 | 8093227 ~ 8093441 (+) |
| G570882 | NA | non-coding | downstream | 24390 | 8108444 ~ 8108672 (+) |
| G570883 | NA | non-coding | downstream | 26790 | 8110844 ~ 8111060 (+) |
| G570868 | NA | other | upstream | 3903 | 8077745 ~ 8079340 (+) |
| G570827 | LOC107379067 | other | upstream | 11685 | 8063107 ~ 8071558 (+) |
| G570875 | NA | other | downstream | 217 | 8084271 ~ 8085753 (+) |
| G570834 | NA | other | downstream | 56228 | 8140282 ~ 8140762 (+) |
| G572315 | NA | other | downstream | 565926 | 8649980 ~ 8650898 (+) |
| G572476 | NA | other | downstream | 838281 | 8922335 ~ 8922794 (+) |
| G572449 | NA | other | downstream | 846055 | 8930109 ~ 8933878 (+) |
