G570877


Basic Information

Item Value
gene id G570877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8087185 ~ 8087540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU650717
ACGGAAGAGCCCGCTTACTTCCTCCAGCCGGGTGATGGTGTAGAAAGACACATCGTAGAACTTCTCGGGTGTGTTCTGTTGCAGGCAGTGCACATCGTCTGCTGTCAGGCGTAGAGGTCCAAACAGAACTTCCTTTCCAAAACGAACTCTCCATCAAATTTTCCTTTCCTGTCCAATTAAAACGAAGCGTATTCTTCAGTCCAGCAGCCGCTGACTGTGACGTGGCCGCCGCCGACGTCGCACCACCTTGAGGATCCCGCGCGAAATGCACTCGatcttgatcttagccaaaaggccgagaagcgataccCACAATGCTTTCGAAAGGCGCCATTCTCGCACACGTCAAATTCGAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106575862

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU650717 True 356 lncRNA 0.52 1 8087185 8087540

Neighbor

gene id symbol gene type direction distance location
LOC110497026 ptprn coding upstream 26350 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 69819 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 152469 7900629 ~ 7934716 (+)
LOC110525651 LOC106575849 coding upstream 186994 7895587 ~ 7900191 (+)
LOC118965232 LOC106575843 coding upstream 260088 7822703 ~ 7827097 (+)
LOC110528741 LOC106573853 coding downstream 166186 8253726 ~ 8301029 (+)
LOC110527258 cacnb4 coding downstream 391206 8478746 ~ 8503131 (+)
LOC110495575 LOC106598167 coding downstream 489199 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 497493 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 502841 8590381 ~ 8592862 (+)
G570874 NA non-coding upstream 3131 8083243 ~ 8084054 (+)
G570873 NA non-coding upstream 4654 8082232 ~ 8082531 (+)
G570872 NA non-coding upstream 5373 8081509 ~ 8081812 (+)
G570871 NA non-coding upstream 5757 8080918 ~ 8081428 (+)
G570870 NA non-coding upstream 6332 8080370 ~ 8080853 (+)
G570876 NA non-coding downstream 478 8088018 ~ 8088396 (+)
G570880 NA non-coding downstream 5687 8093227 ~ 8093441 (+)
G570882 NA non-coding downstream 20904 8108444 ~ 8108672 (+)
G570883 NA non-coding downstream 23304 8110844 ~ 8111060 (+)
G570884 NA non-coding downstream 27362 8114902 ~ 8115374 (+)
G570875 NA other upstream 1432 8084271 ~ 8085753 (+)
G570868 NA other upstream 7845 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 15627 8063107 ~ 8071558 (+)
G570834 NA other downstream 52742 8140282 ~ 8140762 (+)
G572315 NA other downstream 562440 8649980 ~ 8650898 (+)
G572476 NA other downstream 834795 8922335 ~ 8922794 (+)
G572449 NA other downstream 842569 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1879127 9879599 ~ 9980430 (+)

Expression


Co-expression Network