Gene
RNA
| Item | Value |
|---|---|
| gene id | G570963 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 8263015 ~ 8264108 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU650817 | False | 735 | lncRNA | 0.52 | 3 | 8263015 | 8264108 |
| TU650816 | True | 236 | lncRNA | 0.56 | 2 | 8263265 | 8263758 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497026 | ptprn | coding | upstream | 202180 | 8009587 ~ 8061480 (+) |
| LOC110504762 | LOC106573845 | coding | upstream | 245649 | 8008932 ~ 8017366 (+) |
| LOC110495467 | LOC100653484 | coding | upstream | 328299 | 7900629 ~ 7934716 (+) |
| LOC110525651 | LOC106575849 | coding | upstream | 362824 | 7895587 ~ 7900191 (+) |
| LOC118965232 | LOC106575843 | coding | upstream | 435918 | 7822703 ~ 7827097 (+) |
| LOC110527258 | cacnb4 | coding | downstream | 214638 | 8478746 ~ 8503131 (+) |
| LOC110495575 | LOC106598167 | coding | downstream | 312631 | 8576739 ~ 8578039 (+) |
| LOC110496917 | LOC106595105 | coding | downstream | 320925 | 8585033 ~ 8586714 (+) |
| LOC118965341 | LOC106575870 | coding | downstream | 326273 | 8590381 ~ 8592862 (+) |
| LOC110527267 | LOC106575871 | coding | downstream | 333254 | 8597362 ~ 8598340 (+) |
| G570960 | NA | non-coding | upstream | 6286 | 8256530 ~ 8256729 (+) |
| G570949 | LOC106573852 | non-coding | upstream | 18904 | 8241899 ~ 8244111 (+) |
| G570948 | NA | non-coding | upstream | 22113 | 8239334 ~ 8240902 (+) |
| G570942 | NA | non-coding | upstream | 33808 | 8228830 ~ 8229207 (+) |
| G570941 | NA | non-coding | upstream | 34504 | 8227958 ~ 8228511 (+) |
| G570964 | NA | non-coding | downstream | 242 | 8264350 ~ 8264946 (+) |
| G572041 | NA | non-coding | downstream | 66779 | 8330887 ~ 8331205 (+) |
| G572043 | NA | non-coding | downstream | 69375 | 8333483 ~ 8333806 (+) |
| G572044 | NA | non-coding | downstream | 74288 | 8338396 ~ 8339284 (+) |
| G572046 | NA | non-coding | downstream | 78992 | 8343100 ~ 8343630 (+) |
| G570834 | NA | other | upstream | 122253 | 8140282 ~ 8140762 (+) |
| G570875 | NA | other | upstream | 177262 | 8084271 ~ 8085753 (+) |
| G570868 | NA | other | upstream | 183675 | 8077745 ~ 8079340 (+) |
| G570827 | LOC107379067 | other | upstream | 191457 | 8063107 ~ 8071558 (+) |
| G572315 | NA | other | downstream | 385872 | 8649980 ~ 8650898 (+) |
| G572476 | NA | other | downstream | 658227 | 8922335 ~ 8922794 (+) |
| G572449 | NA | other | downstream | 666001 | 8930109 ~ 8933878 (+) |
| LOC110497049 | LOC106575743 | other | downstream | 1702559 | 9879599 ~ 9980430 (+) |
| G573366 | NA | other | downstream | 1864013 | 10128121 ~ 10132016 (+) |
