G572046


Basic Information

Item Value
gene id G572046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8343100 ~ 8343630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652182
GCGGAGAAAcagagtttgagtttgagtttatttttatttttacagggacagtgcacattaatcaacgtttcagtaaaagtgccggttttagccagccggctaattttcaaccgcagtccctgggcaggttattaaaaacaattacaatatagacaatagcaacataggacaagcaagacatagcatacagacagagcaacataggacaagcaagacgtagcatacagacagagcaacataggacaagcaagacgtagcatacagacagagcaacataggacaagcaagacgtagcatacagacagagcaacataaaacaaaaagcagcaagacaaaattcataaaagcaacaaagtgtttccacacctcacaagctacagacaacagacaacatggaaagcggcaacacacagctagggaccatgttcacaaatctgattgacctttagccatgtcttcaagcattttgtgaaagtgtgatatgtggtgcagttatgtgtgtctgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652182 True 507 lncRNA 0.41 2 8343100 8343630

Neighbor

gene id symbol gene type direction distance location
LOC110528741 LOC106573853 coding upstream 42071 8253726 ~ 8301029 (+)
LOC110497026 ptprn coding upstream 282265 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 325734 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 408384 7900629 ~ 7934716 (+)
LOC110525651 LOC106575849 coding upstream 442909 7895587 ~ 7900191 (+)
LOC110527258 cacnb4 coding downstream 135116 8478746 ~ 8503131 (+)
LOC110495575 LOC106598167 coding downstream 233109 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 241403 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 246751 8590381 ~ 8592862 (+)
LOC110527267 LOC106575871 coding downstream 253732 8597362 ~ 8598340 (+)
G572044 NA non-coding upstream 3816 8338396 ~ 8339284 (+)
G572043 NA non-coding upstream 9294 8333483 ~ 8333806 (+)
G572041 NA non-coding upstream 11895 8330887 ~ 8331205 (+)
G570964 NA non-coding upstream 78154 8264350 ~ 8264946 (+)
G570963 NA non-coding upstream 78992 8263015 ~ 8264108 (+)
G572047 NA non-coding downstream 2576 8346206 ~ 8346749 (+)
G572077 NA non-coding downstream 40339 8383969 ~ 8384281 (+)
G572124 NA non-coding downstream 112533 8456163 ~ 8456486 (+)
G572126 NA non-coding downstream 112971 8456601 ~ 8456900 (+)
G572134 NA non-coding downstream 127793 8471423 ~ 8472507 (+)
G570834 NA other upstream 202338 8140282 ~ 8140762 (+)
G570875 NA other upstream 257347 8084271 ~ 8085753 (+)
G570868 NA other upstream 263760 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 271542 8063107 ~ 8071558 (+)
G572315 NA other downstream 306350 8649980 ~ 8650898 (+)
G572476 NA other downstream 578705 8922335 ~ 8922794 (+)
G572449 NA other downstream 586479 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1623037 9879599 ~ 9980430 (+)
G573366 NA other downstream 1784491 10128121 ~ 10132016 (+)

Expression


Co-expression Network