G572047


Basic Information

Item Value
gene id G572047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8346206 ~ 8346749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652183
gttataccctgggttgtcctgaacagaatgagtctgtgttagttacaagatgacatggtgttataccctgggttgtcctgaacagaatgagtctatgttagttacaagatgacatggtgttataccctgggttgtcctgaacagtaTGAGCCTGtgttagttacaagatgacatggtgttataccctgggttgtcctgaacagtaTGAGCCTGTGTTAGTTACAAGATGGCATggcgttataccctgggttgtcctgaacagaatgagtctgtgttagttacaagatgacatggtgttataccctgggttgtcctgaacagaatgagtctgtgttataccctgggttgtcctgaacagaatgagtctatgttagttacaagatgacatggcgttataccctgggttgtcctgaacagaatgagtctatgttagttacaagatgacatggcgttataccctgggttgtcctgaacagaatgagtctgtgttagttacaagatgacatggtgttataccctgggttgtcctgaacagaatgagtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652183 True 544 lncRNA 0.43 1 8346206 8346749

Neighbor

gene id symbol gene type direction distance location
LOC110528741 LOC106573853 coding upstream 45177 8253726 ~ 8301029 (+)
LOC110497026 ptprn coding upstream 285371 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 328840 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 411490 7900629 ~ 7934716 (+)
LOC110525651 LOC106575849 coding upstream 446015 7895587 ~ 7900191 (+)
LOC110527258 cacnb4 coding downstream 131997 8478746 ~ 8503131 (+)
LOC110495575 LOC106598167 coding downstream 229990 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 238284 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 243632 8590381 ~ 8592862 (+)
LOC110527267 LOC106575871 coding downstream 250613 8597362 ~ 8598340 (+)
G572046 NA non-coding upstream 2576 8343100 ~ 8343630 (+)
G572044 NA non-coding upstream 6922 8338396 ~ 8339284 (+)
G572043 NA non-coding upstream 12400 8333483 ~ 8333806 (+)
G572041 NA non-coding upstream 15001 8330887 ~ 8331205 (+)
G570964 NA non-coding upstream 81260 8264350 ~ 8264946 (+)
G572077 NA non-coding downstream 37220 8383969 ~ 8384281 (+)
G572124 NA non-coding downstream 109414 8456163 ~ 8456486 (+)
G572126 NA non-coding downstream 109852 8456601 ~ 8456900 (+)
G572134 NA non-coding downstream 124674 8471423 ~ 8472507 (+)
G572154 NA non-coding downstream 159437 8506186 ~ 8507912 (+)
G570834 NA other upstream 205444 8140282 ~ 8140762 (+)
G570875 NA other upstream 260453 8084271 ~ 8085753 (+)
G570868 NA other upstream 266866 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 274648 8063107 ~ 8071558 (+)
G572315 NA other downstream 303231 8649980 ~ 8650898 (+)
G572476 NA other downstream 575586 8922335 ~ 8922794 (+)
G572449 NA other downstream 583360 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1619918 9879599 ~ 9980430 (+)
G573366 NA other downstream 1781372 10128121 ~ 10132016 (+)

Expression


Co-expression Network