G572173


Basic Information

Item Value
gene id G572173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8538551 ~ 8538774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652343
GCCAGAAAGAGTCACATAAGGATATTgggtcttaatttgatcactctgttgcaagacattttaaacttgtcgtgtatttgaggtttaaaaaagctTCTGAATTTTGagatttccactttgaaatttcagacttgattttccctcacataaaatgtatcaacccctacagaaATGTCCATTACTCATAATCCACAAAACAATTCAAAtgttctgttgctgcagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652343 True 224 lncRNA 0.34 1 8538551 8538774

Neighbor

gene id symbol gene type direction distance location
LOC110527258 cacnb4 coding upstream 35420 8478746 ~ 8503131 (+)
LOC110528741 LOC106573853 coding upstream 237522 8253726 ~ 8301029 (+)
LOC110497026 ptprn coding upstream 477716 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 521185 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 603835 7900629 ~ 7934716 (+)
LOC110495575 LOC106598167 coding downstream 37965 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 46259 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 51607 8590381 ~ 8592862 (+)
LOC110527267 LOC106575871 coding downstream 58588 8597362 ~ 8598340 (+)
LOC110527268 LOC106575873 coding downstream 69910 8608684 ~ 8609863 (+)
G572154 NA non-coding upstream 30639 8506186 ~ 8507912 (+)
G572134 NA non-coding upstream 66044 8471423 ~ 8472507 (+)
G572126 NA non-coding upstream 81651 8456601 ~ 8456900 (+)
G572124 NA non-coding upstream 82065 8456163 ~ 8456486 (+)
G572077 NA non-coding upstream 154270 8383969 ~ 8384281 (+)
G572177 NA non-coding downstream 2169 8540943 ~ 8541142 (+)
G572249 NA non-coding downstream 58105 8596879 ~ 8597150 (+)
G572253 NA non-coding downstream 66081 8604855 ~ 8605723 (+)
G572255 NA non-coding downstream 71537 8610311 ~ 8610698 (+)
G572256 NA non-coding downstream 72488 8611262 ~ 8611479 (+)
G570834 NA other upstream 397789 8140282 ~ 8140762 (+)
G570875 NA other upstream 452798 8084271 ~ 8085753 (+)
G570868 NA other upstream 459211 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 466993 8063107 ~ 8071558 (+)
G572315 NA other downstream 111206 8649980 ~ 8650898 (+)
G572476 NA other downstream 383561 8922335 ~ 8922794 (+)
G572449 NA other downstream 391335 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1427893 9879599 ~ 9980430 (+)
G573366 NA other downstream 1589347 10128121 ~ 10132016 (+)

Expression


Co-expression Network