G572177


Basic Information

Item Value
gene id G572177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8540943 ~ 8541142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652347
ctgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcggcgcacgtgacaaataaactttgatttgatttgatttgcaggtGCTACATCCATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652347 True 200 lncRNA 0.40 1 8540943 8541142

Neighbor

gene id symbol gene type direction distance location
LOC110527258 cacnb4 coding upstream 37812 8478746 ~ 8503131 (+)
LOC110528741 LOC106573853 coding upstream 239914 8253726 ~ 8301029 (+)
LOC110497026 ptprn coding upstream 480108 8009587 ~ 8061480 (+)
LOC110504762 LOC106573845 coding upstream 523577 8008932 ~ 8017366 (+)
LOC110495467 LOC100653484 coding upstream 606227 7900629 ~ 7934716 (+)
LOC110495575 LOC106598167 coding downstream 35597 8576739 ~ 8578039 (+)
LOC110496917 LOC106595105 coding downstream 43891 8585033 ~ 8586714 (+)
LOC118965341 LOC106575870 coding downstream 49239 8590381 ~ 8592862 (+)
LOC110527267 LOC106575871 coding downstream 56220 8597362 ~ 8598340 (+)
LOC110527268 LOC106575873 coding downstream 67542 8608684 ~ 8609863 (+)
G572173 NA non-coding upstream 2169 8538551 ~ 8538774 (+)
G572154 NA non-coding upstream 33031 8506186 ~ 8507912 (+)
G572134 NA non-coding upstream 68436 8471423 ~ 8472507 (+)
G572126 NA non-coding upstream 84043 8456601 ~ 8456900 (+)
G572124 NA non-coding upstream 84457 8456163 ~ 8456486 (+)
G572249 NA non-coding downstream 55737 8596879 ~ 8597150 (+)
G572253 NA non-coding downstream 63713 8604855 ~ 8605723 (+)
G572255 NA non-coding downstream 69169 8610311 ~ 8610698 (+)
G572256 NA non-coding downstream 70120 8611262 ~ 8611479 (+)
G572260 NA non-coding downstream 73045 8614187 ~ 8614424 (+)
G570834 NA other upstream 400181 8140282 ~ 8140762 (+)
G570875 NA other upstream 455190 8084271 ~ 8085753 (+)
G570868 NA other upstream 461603 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 469385 8063107 ~ 8071558 (+)
G572315 NA other downstream 108838 8649980 ~ 8650898 (+)
G572476 NA other downstream 381193 8922335 ~ 8922794 (+)
G572449 NA other downstream 388967 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1425525 9879599 ~ 9980430 (+)
G573366 NA other downstream 1586979 10128121 ~ 10132016 (+)

Expression


Co-expression Network