XLOC_025115 (cyp2k21)


Basic Information

Item Value
gene id XLOC_025115
gene name cyp2k21
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 12744083 ~ 12749198 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049642
AGAGAGAAAATGGCTGTTGTCGAGTCACTTCTGCAGTTTGCCAGCACAGGCACATTGCTGGGTGCTTTGCTGTTGTTTCTGGTTTTGTATTTAGTGTCATCTGGATCTGAATCTCAGAAAGAAGGAAAAGAGCCACCGGGACCCAAACCACTACCGCTGGTGGGAAACCTGCTGACCCTTGACCTCACAAGACCTTTCGACACATTTTTTAAGCTCTCCAAAACCTATGGAAATGTATTCCAAGTGTATTTGGGACCTGAAAAAGCAGTGGTCCTAGTTGGATACAAAACGGTCAAAGAGGCGCTTGTGAACTACGCAGAAGAGTTTGGTGATCGAGAAATTGGACCAGGTTTTAGTATAATGAATGATGAACATGGAATCCTCTTTTCCAATGGAGAGAACTGGAAAGAGATGCGACGCTTCGCTCTCAGCAACCTGCGGGACTTTGGGATGGGCAAAAGAGGAAGTGAAGAGAAAATCATTGAAGAAATTCATCATCTCAAAGGAGAATTTGATAAGTTTGAAGGGAAGCCCTTTGACACAACTCAGCCTGTGAACTACGCTGTGTCAAACATCATCTCGTCTATTGTGTACGGAAGCAGATTTGAATACACAGACCCTCAATTCACAGAAATGGTTGACCGAGCAAATGAAAATGTTCGGGTTGGCGGATCAATTTCCATGTGGCTTTACGATATATTTCCCTGGTTGGGTCCATTTCTGAAAAACAAAAGGATTATTGTTGAAAATATTATCCAAAGTAGAGTCCAGATGACAAAGTTGATCACTGCTCTTCTGGAGACTCTGAATCCAAATGACCCCAGAGGCTTTGTTGACTCCTTTCTCATCCGCAAACTGAGCGATGAGAAATCTGGCAAGAAGGATTCATACTTTCATGAGGAAAATCTAATGATGACAGTGACAAATTTATTTATAGCTGGTACTGACACCACAGGAACAACTCTGCGCTGGGGTCTGATGCTCATGGCTAAATACCCCCACATTCAAGATCGAGTTCAAGAGGAGATTGACAGAGTGATTGGTGGACGTCAACCAGTGGTGGAAGACAGGAAGAAATTACCATATACAGATGCTGTCATTCATGAAATTCAGAGACTGGCCAACATTGTGCCGTTGAGTCTTCCACATAGAACTACCAGTGACATTACCTTCAATGGATACTTCATCAAGAAGGGAACTACAGTTGTTCCTCTGCTGACGTCTGTTCTGAAGGATGAAAGTGAATGGGAGAAACCAAACAGCTTTTACCCAGAACACTTCCTTGATGAGAAGGGCCAGTTCGTCAGAAGAGATGCTTTCATGCCCTTTTCTGCAGgGCGCAGGGTTTGTCTGGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTGTTCTTCACGTCTCTCCTTCAGAGCTATCGCTTCACAACTCCACCTGGAGTGTCTGAAGATGAGCTGGATCTCAAAGGAATTGTTGGAATCACGTTGAACCCATCTCCACACAAGCTGTGTGCAATCAGACGCTCCTGATCCAAGAAAATATAAG
>TCONS_00049643
ATGGCTGTTGTCGAGTCACTTCTGCAGTTTGCCAGCACAGGCACATTGCTGGGTGCTTTGCTGTTGTTTCTGGTTTTGTATTTAGTGTCATCTGGATCTGAATCTCAGAAAGAAGGAAAAGAGCCACCGGGACCCAAACCACTACCGCTGGTGGGAAACCTGCTGACCCTTGACCTCACAAGACCTTTCGACACATTTTTTAAGCTCTCCAAAACCTATGGAAATGTATTCCAAGTGTATTTGGGACCTGAAAAAGCAGTGGTCCTAGTTGGATACAAAACGGTCAAAGAGGCGCTTGTGAACTACGCAGAAGAGTTTGGTGATCGAGAAATTGGACCAGGTTTTAGTATAATGAATGATGAACATGGAATCCTCTTTTCCAATGGAGAGAACTGGAAAGAGATGCGACGCTTCGCTCTCAGCAACCTGCGGGACTTTGGGATGGGCAAAAGAGGAAGTGAAGAGAAAATCATTGAAGAAATTCATCATCTCAAAGGAGAATTTGATAAGTTTGAAGGGAAGCCCTTTGACACAACTCAGCCTGTGAACTACGCTGTGTCAAACATCATCTCGTCTATTGTGTACGGAAGCAGATTTGAATACACAGACCCTCAATTCACAGAAATGGTTGACCGAGCAAATGAAAATGTTCGGGTTGGCGGATCAATTTCCATGTGGGTGAGTTTAACCAACTAA
>TCONS_00049644
GGAACTACAGTTGTTCCTCTGCTGACGTCTGTTCTGAAGGATGAAAGTGAATGGGAGAAACCAAACAGCTTTTACCCAGAACACTTCCTTGATGAGAAGGGCCAGTTCGTCAGAAGAGATGCTTTCATGCCCTTTTCTGCAGgGCGCAGGGTTTGTCTGGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTGTTCTTCACGTCTCTCCTTCAGAGCTATCGCTTCACAACTCCACCTGGAGTGTCTGAAGATGAGCTGGATCTCAAAGGAATTGTTGGAATCACGTTGAACCCATCTCCACACAAGCTGTGTGCAATCAGACGCTCCTGA

Function

symbol description
cyp2k21 Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091113-17 Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000105151

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049642 False 1540 mRNA 0.44 9 12744083 12749198
TCONS_00049643 False 696 mRNA 0.44 4 12744092 12747108
TCONS_00049644 True 330 mRNA 0.49 2 12748038 12749182

Neighbor

gene id symbol gene type direction distance location
XLOC_025114 cyp2k19 coding upstream 3773 12732382 ~ 12740310 (+)
XLOC_025113 cyp2k20 coding upstream 13529 12718100 ~ 12730554 (+)
XLOC_025112 cyp2k18 coding upstream 28651 12710350 ~ 12715432 (+)
XLOC_025111 abca3b coding upstream 44178 12593558 ~ 12699905 (+)
XLOC_025110 ccnf coding upstream 157470 12554801 ~ 12586613 (+)
XLOC_025116 cyp2k17 coding downstream 6337 12755535 ~ 12763119 (+)
XLOC_025117 cyp2k16 coding downstream 15696 12764894 ~ 12780758 (+)
XLOC_025118 cyp2k8 coding downstream 35262 12784460 ~ 12802380 (+)
XLOC_025119 cyp2k6 coding downstream 67164 12816362 ~ 12826387 (+)
XLOC_025120 si:ch211-8c17.2 coding downstream 79626 12828824 ~ 12832519 (+)
XLOC_025429 BX649540.1 misc downstream 17499541 30248739 ~ 30249036 (+)
XLOC_025107 NA non-coding upstream 479625 12239692 ~ 12264458 (+)
XLOC_025106 NA non-coding upstream 662710 12076852 ~ 12081373 (+)
XLOC_025105 NA non-coding upstream 668948 12074888 ~ 12075135 (+)
XLOC_025103 NA non-coding upstream 885280 11855320 ~ 11858803 (+)
XLOC_025102 NA non-coding upstream 1163363 11576675 ~ 11580720 (+)
XLOC_025122 NA non-coding downstream 89496 12838694 ~ 12854479 (+)
XLOC_025125 LO018183.1 non-coding downstream 400352 13149550 ~ 13167328 (+)
XLOC_025128 NA non-coding downstream 611505 13360703 ~ 13367508 (+)
XLOC_025129 NA non-coding downstream 640664 13389862 ~ 13406082 (+)
XLOC_025130 dre-mir-23a-2 non-coding downstream 657028 13406226 ~ 13406323 (+)

Expression


Co-expression Network