G572249


Basic Information

Item Value
gene id G572249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8596879 ~ 8597150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652431
TACCTGTACATTACTCGTGTAATAATTTACAGGAAATATGTTCATTTAGCCTATTTTCACTTTGAAATGAAAAACCTAATCCCAGTCAATCAATCACTTATCACTGAACATCTAGATCATCTAGATCAAATATTGTTTTCAGTGATTTCTCTGACAGGACATGTCAGTGTGTTAAATTGAGAGGcaatgtacagtatacatgaCCAGCCTCTCATAACAAGAAGTTTGCTCTCTCCTATCCCTCACTCATTATGATGTGCATAATGTAATgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652431 True 272 lncRNA 0.35 1 8596879 8597150

Neighbor

gene id symbol gene type direction distance location
LOC118965341 LOC106575870 coding upstream 4017 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 10165 8585033 ~ 8586714 (+)
LOC110495575 LOC106598167 coding upstream 18840 8576739 ~ 8578039 (+)
LOC110527258 cacnb4 coding upstream 93748 8478746 ~ 8503131 (+)
LOC110528741 LOC106573853 coding upstream 295850 8253726 ~ 8301029 (+)
LOC110527267 LOC106575871 coding downstream 212 8597362 ~ 8598340 (+)
LOC110527268 LOC106575873 coding downstream 11534 8608684 ~ 8609863 (+)
LOC110527270 LOC106574807 coding downstream 23513 8620663 ~ 8626882 (+)
LOC118965237 LOC106574888 coding downstream 290862 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 313541 8910691 ~ 8912800 (+)
G572177 NA non-coding upstream 55737 8540943 ~ 8541142 (+)
G572173 NA non-coding upstream 58105 8538551 ~ 8538774 (+)
G572154 NA non-coding upstream 88967 8506186 ~ 8507912 (+)
G572134 NA non-coding upstream 124372 8471423 ~ 8472507 (+)
G572126 NA non-coding upstream 139979 8456601 ~ 8456900 (+)
G572253 NA non-coding downstream 7705 8604855 ~ 8605723 (+)
G572255 NA non-coding downstream 13161 8610311 ~ 8610698 (+)
G572256 NA non-coding downstream 14112 8611262 ~ 8611479 (+)
G572260 NA non-coding downstream 17037 8614187 ~ 8614424 (+)
G572262 NA non-coding downstream 18374 8615524 ~ 8615754 (+)
G570834 NA other upstream 456117 8140282 ~ 8140762 (+)
G570875 NA other upstream 511126 8084271 ~ 8085753 (+)
G570868 NA other upstream 517539 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 525321 8063107 ~ 8071558 (+)
LOC110497026 ptprn other upstream 543148 8009587 ~ 8061480 (+)
G572315 NA other downstream 52830 8649980 ~ 8650898 (+)
G572476 NA other downstream 325185 8922335 ~ 8922794 (+)
G572449 NA other downstream 332959 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1369517 9879599 ~ 9980430 (+)
G573366 NA other downstream 1530971 10128121 ~ 10132016 (+)

Expression


Co-expression Network